| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_00020 |
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| Symbol | |
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| ID | 9295480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Croceibacter atlanticus HTCC2559 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014230 |
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| Strand | - |
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| Start bp | 28286 |
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| End bp | 32593 |
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| Gene Length | 4308 bp |
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| Protein Length | 1435 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | |
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| Product | DNA-directed RNA polymerase beta' subunit |
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| Protein accession | YP_003714774 |
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| Protein GI | 298206595 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGAA ATAATGAACA GAATACAGTA AAGAGATTTA ATAAAATCTC TATTGGTTTA
GCTTCTCCAG AAGCGATTTT GGCAGAGTCG CGTGGTGAGG TGTTAAAACC AGAAACTATA
AACTACCGTA CGCACAAACC AGAGCGAGAC GGTCTTTTTT GCGAGCGTAT CTTTGGTCCT
GTGAAGGATT ACGAATGTGC TTGTGGAAAA TATAAAAGAA TACGCTACAA AGGTATTGTT
TGTGACCGTT GTGGTGTAGA GGTTACAGAA AAGAAAGTAC GTCGTGATCG TGTAGGACAC
ATTAATTTAG TTGTTCCTGT AGCTCACATT TGGTACTTCC GTTCTTTACC AAACAAAATA
GGTTACCTTC TTGGATTGCC ATCTAAGAAG TTAGATATGA TTATATACTA TGAAAGGTAT
GTAGTTATAC AACCAGGTAT CGCAAAGAAT GAAGATGGAG AAGCGTTACA AAAATTAGAT
TTCCTTACAG AAGAAGAATA CTTAAATATT CTGGAAACTC TTCCACAGGA AAACTTATAC
TTAGAAGATA GTGATCCAAA CAAATTCATC GCCAAAATGG GTGCTGAATG TTTAATTGAT
TTACTACAAC GTATAGATTT AGATGCACTT TCTTTTGAAT TGCGTCATAA GGCTAACAAT
GAAACTTCTA AGCAACGTAA AACAGAAGCA TTAAAAAGAC TTCAGGTTGT AAAAGCTTTA
CGTGATTCTA ATGAATACCG TGAAAATAAA CCAGAGTGGA TGATAATGAA AGTAATTCCG
GTTATACCAC CAGAATTACG TCCGTTAGTG CCTCTTGATG GTGGTCGTTT TGCAACTTCA
GATTTAAATG ATCTTTACCG TCGTGTTATT ATACGTAATA ACCGTCTTAA GAGATTAGTT
GAAATTAAAG CTCCAGAAGT AATTCTTAGA AATGAGAAAC GTATGCTTCA GGAATCTGTA
GATTCTTTAT TTGATAACAC AAGAAAATCT TCAGCAGTAA AGACAGATAG TAACCGTCCT
TTAAAGTCAC TTTCAGATTC ATTGAAAGGT AAGCAAGGTC GTTTCCGTCA AAACCTACTT
GGTAAGCGTG TAGATTACTC AGCACGTTCA GTTATTGTTG TAGGACCAGA ATTAAAGTTA
TTTGAATGTG GTCTTCCAAA AAATATGGCT GCAGAACTTT ATAAGCCTTT TGTAATACGT
AAGCTTATTG AGCGCGGTAT TGTTAAGACT GTAAAATCTG CTAAGAAGAT TATAGATAAA
AAGGAGCCTG TAGTTTGGGA TATTCTGGAA AATGTACTTA AAGGACATCC AGTATTACTA
AACCGTGCGC CTACGCTTCA CCGTTTAGGT ATTCAAGCTT TTCAACCTAA ATTAATTGAA
GGTAAAGCAA TTCAATTACA CCCATTGGTG TGTACAGCAT TTAACGCCGA TTTTGATGGT
GATCAAATGG CAGTACACTT ACCATTAGGA CCAGAAGCAA TTTTGGAGGC TCAATTATTA
ATGTTGGCTT CTCATAATAT TCTTAACCCT GCAAATGGCT CACCAGTAAC GGTACCATCT
CAGGATATGG TCTTGGGTCT TTACTATATG ACTAAAGGAA GAAAGCATAC GCCTGAAGTA
CCTATTGTTG GTGAAGGCTT AACTTTTTAT TCTGCAGAAG AAGTAGTAAT TGCATATAAC
GAAAAACGTT TAAATATTAA CGCAAATATT AAAGTTAGAA CTAAAGACTT TAATGAAGAA
GGCGAGCTTG TTAATCAAAT TATTGAGACA ACAACTGGTC GCGTAATATT TAATATGGAG
GTTCCTGAGA AAGCAGGTTA CATAAACCAA GTATTAACTA AGAAGGCTCT TAGAGATATT
ATTGGTGATA TTTTAAAAGT AACTAGTGTT CCAGAAACGG CACAATTCTT AGATAGAATT
AAATCATTAG GTTATGACTT TGCATTCCGT GGTGGTCTTT CATTCTCATT AGGTGATATT
ATTATACCGC CAGAGAAGCA ACAGATGATT GATGAGGCAA ATGAGCAAGT TGAAGGTATC
CGTGGAAACT ATAATATGGG TCTTATAACC TTTAACGAGC GTTATAACCA AGTAATTGAT
ATATGGACTG CTACCAACGC TAACCTTACA GACTTGGCAA TGAGCCGAAT TAGTACAGAC
CAGCAAGGAT TTAACTCAGT ATTTATGATG TTAGATTCTG GAGCGCGTGG TAGTAAAGAA
CAAATTCGCC AGTTAACAGG TATGCGTGGT CTTATGGCTA AGCCTAAAAA ATCTAACTCT
GGTGGTGGTG AAATTATTGA AAACCCAATT CTTTCTAACT TTAAGGAAGG TCTTTCAATT
TTAGAATATT TTATCTCAAC TCACGGTGCA CGTAAAGGTC TTGCCGATAC AGCACTTAAA
ACAGCCGATG CTGGTTACTT AACTCGTCGT TTAGTTGATG TATCACAAGA TGTGATTATT
AACGAAACAG ACTGTGGTAC CTTGCGTGGT GTAGAAGTTT CTCCATTAAA GAAAAATGAA
GAAGTTGTTG AGAAGTTAAG TGAAAGAATT ATTGGTCGTA CAGCATTAAA CGATGTTATA
AACCCACTTA CTAAAGAAGT ATTAGTAGAA GCAGGTGTAG AAATTACAGA TGCTATGGCT
AAGCTTATTG AAGCAGCACC TATTGAAAGT GTAGAGGTAA GATCTGCATT ATCTTGTGAA
GCTAAAAAAG GTATTTGTGT TAAATGTTAT GGTCGTAACC TAGCTACTGG TAAAACAGTA
CAAATGGGTG AAGCTGTAGG TGTTGTAGCA GCACAATCTA TTGGTGAACC TGGTACACAG
CTTACGCTAC GTACATTCCA CGTTGGTGGT GTTGCGGGTA ACATTTCAGA AGAGAATAAG
CACATTGCTA AGTTTAATGG TGTTGCTGAA ATTGAAGATC TTAAAACGGT AAAAGGAGAA
AACAACCAAG GCGAAGAAGC TGATATTGTA ATCTCTAGAA CTACAGAGAT TAAGATTGTA
GATAAGAAGA CAGGTATTGT TTTAAGTACT AGTAATGTTC CTTATGGTGC TCAAATATTT
GTGAAGCCAG GAGACAAAGT TTCTAAAGAC GATGTTTTAG TACAATGGGA TCCATTTAAC
GGTGTGATTA TTTCTGAATT TGCTGGTAAG ATTAAGTATG AAAACCTTGT ACAAGGTATG
ACATACCAAG TTGAAACAGA TGAGCAAACA GGTTTCCAAG AAAAAGTAAT TACAGAATCT
CGTGATAAGA AAAAGATACC TACGCTATTA ATTATGGGTA AAAAGGATGA AGTTATTCGT
TCTTACAACT TACCAGTTGG AGCTCACATA ATGGTAGATG ACGGTGATAA GATTAAAATT
GGTAAAATCT TAGTTAAGAT ACCTCGTAAA TCTGCAAAAG CAGGTGATAT TACAGGAGGT
CTTCCACGTG TAACAGAACT TTTCGAAGCT CGTAATCCTT CTAATCCTGC TGTAGTTAGT
GAGATAGATG GTGTAGTTAG CTTTGGTAAA ATTAAACGTG GTAACAGAGA GATTATAGTT
GAGTCTAAAC TTGGTGAGGT TAAGAAATAC TTAGTTAAGC TTTCTAACCA AATTCTTGTT
CAAGAAAATG ATTATGTAAG AGCAGGTATG CCATTATCAG ACGGATCTAT AACTCCGGAA
GACATCTTAA ATATTAAAGG GCCAAGCGCT GTACAACAGT ACTTAGTTAA TGAGGTTCAA
GAAGTTTACC GATTACAAGG TGTTAAGATT AATGATAAGC ACTTTGAAGT TGTTGTAAGA
CAAATGATGC GTAAGGTTAA GATTAATGAT CCAGGTGATA CAATTTTCTT AGAGAACCAA
TTAATTCATA AGTCTGACTT TATCGAAGAG AACGATGCTA TTTTTGGTAT GAAAGTAGTT
GATGATGCTG GTGATAGTAA TAACTTGAAG CCAGGACAAA TTGTTTCTCC AAGAGAATTA
CGTGACGAAA ATAGCTTATT AAGACGAGAG GATAAGAACC TAGTTGTTGC AAAAGATGCA
CAGCCAGCTA CTGCTACTCC AATCTTACAA GGTATTACAA GAGCGTCATT ACAGACTAAG
TCATTTATCT CTGCTGCCTC TTTCCAAGAA ACAACTAAAG TATTAAACGA AGCTGCAGTA
AGCGGTAAGG TAGATTCTTT AGAAGGACTT AAAGAAAATG TAATTGTAGG ACACAGAATT
CCTGCAGGAA CAGGTATGCG TCGCTATGAT AACATTATTG TAGGTTCTAA AGAGGAAATG
AACGAAATGG TTGAAGCTAA ACAGGAAACT GAAGTGAACT ATAATTAA
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| Protein sequence | MARNNEQNTV KRFNKISIGL ASPEAILAES RGEVLKPETI NYRTHKPERD GLFCERIFGP
VKDYECACGK YKRIRYKGIV CDRCGVEVTE KKVRRDRVGH INLVVPVAHI WYFRSLPNKI
GYLLGLPSKK LDMIIYYERY VVIQPGIAKN EDGEALQKLD FLTEEEYLNI LETLPQENLY
LEDSDPNKFI AKMGAECLID LLQRIDLDAL SFELRHKANN ETSKQRKTEA LKRLQVVKAL
RDSNEYRENK PEWMIMKVIP VIPPELRPLV PLDGGRFATS DLNDLYRRVI IRNNRLKRLV
EIKAPEVILR NEKRMLQESV DSLFDNTRKS SAVKTDSNRP LKSLSDSLKG KQGRFRQNLL
GKRVDYSARS VIVVGPELKL FECGLPKNMA AELYKPFVIR KLIERGIVKT VKSAKKIIDK
KEPVVWDILE NVLKGHPVLL NRAPTLHRLG IQAFQPKLIE GKAIQLHPLV CTAFNADFDG
DQMAVHLPLG PEAILEAQLL MLASHNILNP ANGSPVTVPS QDMVLGLYYM TKGRKHTPEV
PIVGEGLTFY SAEEVVIAYN EKRLNINANI KVRTKDFNEE GELVNQIIET TTGRVIFNME
VPEKAGYINQ VLTKKALRDI IGDILKVTSV PETAQFLDRI KSLGYDFAFR GGLSFSLGDI
IIPPEKQQMI DEANEQVEGI RGNYNMGLIT FNERYNQVID IWTATNANLT DLAMSRISTD
QQGFNSVFMM LDSGARGSKE QIRQLTGMRG LMAKPKKSNS GGGEIIENPI LSNFKEGLSI
LEYFISTHGA RKGLADTALK TADAGYLTRR LVDVSQDVII NETDCGTLRG VEVSPLKKNE
EVVEKLSERI IGRTALNDVI NPLTKEVLVE AGVEITDAMA KLIEAAPIES VEVRSALSCE
AKKGICVKCY GRNLATGKTV QMGEAVGVVA AQSIGEPGTQ LTLRTFHVGG VAGNISEENK
HIAKFNGVAE IEDLKTVKGE NNQGEEADIV ISRTTEIKIV DKKTGIVLST SNVPYGAQIF
VKPGDKVSKD DVLVQWDPFN GVIISEFAGK IKYENLVQGM TYQVETDEQT GFQEKVITES
RDKKKIPTLL IMGKKDEVIR SYNLPVGAHI MVDDGDKIKI GKILVKIPRK SAKAGDITGG
LPRVTELFEA RNPSNPAVVS EIDGVVSFGK IKRGNREIIV ESKLGEVKKY LVKLSNQILV
QENDYVRAGM PLSDGSITPE DILNIKGPSA VQQYLVNEVQ EVYRLQGVKI NDKHFEVVVR
QMMRKVKIND PGDTIFLENQ LIHKSDFIEE NDAIFGMKVV DDAGDSNNLK PGQIVSPREL
RDENSLLRRE DKNLVVAKDA QPATATPILQ GITRASLQTK SFISAASFQE TTKVLNEAAV
SGKVDSLEGL KENVIVGHRI PAGTGMRRYD NIIVGSKEEM NEMVEAKQET EVNYN
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