Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mesil_3228 |
Symbol | |
ID | 9252758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus silvanus DSM 9946 |
Kingdom | Bacteria |
Replicon accession | NC_014213 |
Strand | + |
Start bp | 29303 |
End bp | 30121 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003686555 |
Protein GI | 297567584 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00685083 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAGGT CTCTGAAAGC CGTGCTGACC CACCTGCTGT TGGCAAGTGG GGCCTTCCTC TCGGCGATGC CCTTCTTGTG GATGCTCACC ACCGCGCTCA AGCCGGAGAG CGCCTTATAT CAGCCGCCGC TGCTGGTTCC CACGCACTTC GAGTGGGCTA ACTTCGTCAA AGCCTGGCAG GCCGCTCCCT TCCCCCGCTT CTTCCTCAAC AGCGCGGTGA TGACCGTGGG GATCGTCCTT GCTCAGACCC TCTTCTCGGC CATGGCCGGC TACGCCTTCG CCCGGATGCG CTTCGCCGGG CGGGATCTGC TGTTTTTCTT CGTGCTGGGC ACCATGATGA TCCCTTTCCC GGTGACCCTC ATCCCCAGCT TTTTGGTGGT GAACGCTCTG GGCTGGATCG ACACCTATAA CGCCCTCATC ATCCCGCGGG CGGTCTCGGC CTTCGCCATC TTCCTTTTCC GCCAGTTCTT CCTCTCCCTG CCCAAAGAGC TCGAGGAAGC CGCCCTGATC GATGGGGCCG GGCGCCTGAC GATCTTCTTC CGCATCGTGC TGCCCCTGTC CACCCCGGTG ATCGCGGCCA GCGCGATCTT CTCCTTCCTC TTCGCCTGGA ACGATTTTCT CTGGCCGCTC TTGGTGACCA ACTCGCCGGA CATGCGCACC GTGCAGGTGG GCCTGGCCAT GTTCCAGGGG CAGTATGGGG TGTTCTGGAC GCTCTTGAGC GCCGCCGCCA CCATCGTCAC CTTGCCTGCC ATCCTGGCCT TCCTCGCCGC GCAGCGGCAG TTCATCGCCG GCATCACCAA CACCGGCCTC AAGGAGTAG
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Protein sequence | MARSLKAVLT HLLLASGAFL SAMPFLWMLT TALKPESALY QPPLLVPTHF EWANFVKAWQ AAPFPRFFLN SAVMTVGIVL AQTLFSAMAG YAFARMRFAG RDLLFFFVLG TMMIPFPVTL IPSFLVVNAL GWIDTYNALI IPRAVSAFAI FLFRQFFLSL PKELEEAALI DGAGRLTIFF RIVLPLSTPV IAASAIFSFL FAWNDFLWPL LVTNSPDMRT VQVGLAMFQG QYGVFWTLLS AAATIVTLPA ILAFLAAQRQ FIAGITNTGL KE
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