| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_3124 |
|---|
| Symbol | |
|---|
| ID | 9252650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | + |
|---|
| Start bp | 3175833 |
|---|
| End bp | 3176756 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | Proline dehydrogenase |
|---|
| Protein accession | YP_003686463 |
|---|
| Protein GI | 297567491 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.206513 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTGA ACCTAAGCTA CCGCTCGTTT GTGCTAGCTA TCGCACAAAA CCCCAGCGTG
AAAAACCTGG TGCTGACCCG TGGTAAGGGG CTTTCCCGCC GCTTCGTGGC AGGGGATACC
CTGGAAGAAG CCCTGAAAGT GGTGGAGGGG CTCGAGCGTG AGCGCATTCA TGCCATCCTT
GACCTACTGG GGGAGATGGT GACCTCAGAA GAGATGGCTC GAGGCTTCCA AGCAGAGATC
GTCGGATTGA TCCGGGCCTT GGGGGCTCGA CCTTACCCGC GCTATGTGTC CGTGAAGCTC
ACCCAGCTAG GTCTGGACCT CTCCGAAGAC CTAGCTTTTT CCTTGATGCA GGGGATTTTG
CAAGAAGCCC GCCAAGCAGA TTGCTTCGTG CGCATAGACA TGGAGGATTC CCCCCGGGTG
GACGCTACCT TACGGGTCTA CCGGCGGCTG CGCGAGGAGG GATATACCCA TACCGGGATC
GTGCTGCAAA GCTACCTCAA GCGTAGCGAG AAGGACCTCG AGGCCCTGCT GCCCCTGAAG
CCTGCCGTGC GGATCGTCAA AGGGGCCTAT AAGGAGCCCC CCGAGGTAGC CTTCCAGGAC
AAGCGCCTTA TCGACGCGCA ATACCTGCTG TTGGCCAAAA AGGCCTTGGA AAACGGCCTG
CCTACCGCCA TCGCCACCCA CGACCCCCAC CTTATCGCAG AGATGCAGCG CTGGACCGCC
GAGAAAGGCA TCAGCAAGGA AGGCTTCGAG TTCCAACTGC TGTATGGGGT GCGCCGGGAC
GAACAGCGTC GGCTCGCCGC TGAGGGCTAT ACCGTGCGGG CTTACGTGCC CTATGGCACC
GACTGGTATC CCTATCTCTC CCGCCGCATC GCCGAGCGAC CCGAGAATCT GCTGTTTGTG
GCCCGAAGCC TGGTGCAGGG GTAG
|
|---|
| Protein sequence | MDLNLSYRSF VLAIAQNPSV KNLVLTRGKG LSRRFVAGDT LEEALKVVEG LERERIHAIL
DLLGEMVTSE EMARGFQAEI VGLIRALGAR PYPRYVSVKL TQLGLDLSED LAFSLMQGIL
QEARQADCFV RIDMEDSPRV DATLRVYRRL REEGYTHTGI VLQSYLKRSE KDLEALLPLK
PAVRIVKGAY KEPPEVAFQD KRLIDAQYLL LAKKALENGL PTAIATHDPH LIAEMQRWTA
EKGISKEGFE FQLLYGVRRD EQRRLAAEGY TVRAYVPYGT DWYPYLSRRI AERPENLLFV
ARSLVQG
|
|---|
| |