Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mesil_3114 |
Symbol | |
ID | 9252640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus silvanus DSM 9946 |
Kingdom | Bacteria |
Replicon accession | NC_014212 |
Strand | + |
Start bp | 3164799 |
End bp | 3166691 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | arginine decarboxylase |
Protein accession | YP_003686454 |
Protein GI | 297567482 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.188561 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGAGAAGC TCAAGCGCTA TACCGTTAAA GATGCCGAGG AAACCTACCT GGTGCCCCAG TGGGCCGCCG GGTTTTTTCG TGTGGGCGAG GACGGGCAGC TCGAGGTCAC GCCCGAGGGG AACGGTGGCC CCAGCGCCTC GCTCTATGAG ATCGTATCGG ACTTGCGCGA CGAGGGTCGC CCCCTGCCGG TGCTGCTGCG CTTCCCCCAG ATCCTGGCAG CCCGGGTGGT CGAACTCAAC GAGGCTTTCC GCCGGGCCAT CCAGAAGTAC GAGTACAAGG CCGAGTACCG CGGCCTGTAC CCGGTCAAGG TCAATCAGCG GCGCATAGTG GTGGAGACCA TCGCCAAAGC CGGGCGGCCT TACGCCCATG GCCTCGAGGC CGGAAGCAAG GCCGAGCTGG CCCTGATCCT GGCCCAAGAC CTGCACCCCG AGGCCATCAT CGCCTGCAAC GGCTTCAAGG ATGACGACTT CATCCGGCTG GCCCTGATGG GTAAGAAGCT GGGCAAGAAC GTGATCATCA CCCTCGAGAA GTTCGCCGAG CTGGGCCGGG TCATGCGGAT TGCCAAAGAA CTGGGTGTCG AACCTTCCAT CGGTATCCGC TACAAGCTCA AGGCCAAGGG CTCGGGGCAG TGGGAAGAAT CCGGTGGTGA GTCAGCTAAG TTCGGCCTCA CCACCCCAGA GATCATCCGG GCGGTAGACC TGCTGGCCAA GGCCGGGATG CTCGGCACCA TCGCCATGTT GCACTCCCAC GTGGGCAGTC AGGTCACCGA CATCCGCCGC ATCAAGCAGG CGGTGCGCGA GATCGCCCAG ACCTATGTGC AACTGCGCAA GCTGGGAGCC CCAGTGCGCT ACTTGAACCT AGGGGGCGGC TTGGCGGTGG ATTACGACGG CTCCAAGACC GCTTTTTATG CTTCTGCCAA CTACACCCTC TCCGAGTACG CTGAGGATTT GGTGTACGTG ACCAAGGAGG TCTGTGACGG TCACGGCGAA CCCCACCCCA TCCTGGTCAC CGAGTCGGGT CGGGCCATCA CCGCTTACCA CAGCGTGCTG GTGCTCGAGG TCGTAGACAC CATCCGCCCC CCCGGCGAGG AGAAGCTCGA AGAACCCCCC GATGCCCATC CGGTGGTGGC GGATATGTTC GATCTGGCCC GCAGCATCTC GGCCAAGAAC TATCGCGAGG TCTACCACGA CGCTTTCTCC AACAAGGACA CGGTGCAAAA CCTCTACGAT CTGGGGCTGA TCAGCTTGCG CGACCGAGCC TTGGCCGAAA GCCTCTTTTA CCAGATCGCC CGTAAGACGC TCAAGCTGGC CCTCGAGCTG GACTATCCGG CGGACGAGCT AGAAGATTTG CAGAAAATGC TGGCCGATAA GCTGGTCTGC AACTTCAGCC TCTTCCAAAG CCTGCCGGAT AGCTGGGCCA TCAAACAGAT GTTCCCCATC GTGCCGCTCA ACCGCCTCGA CGAGCGGCCT ACCCGCGAGG CCACGTTGGT GGACATCACC TGCGACTCCG ACGGCAAGTT TGACCGCTTC ATCGACCTCC ACGATGTACG CAACACCCTT CCGGTGCACG AACTGCGCCC CGGGGAGCGC TACTATTTGG GAGTCTTTCT CACTGGGGCT TACCAGGATG TGCTGGGCAA CTCCCACAAC CTCTTCGGGC GCATTGGCGA AGCCCACGTG ACCATCGACG AGGATGGCTA TGACATCGAG CGTTTTGTGG TGGGCGAGAA AGCCCGGCGG GTCATTGAGA AGATGGGCTA CGAGGATGAC GAGCTGGCCG AAGCGGTAGA GAAACTGGTG CGCAGCTCCA AGAAACTCAC CCCCGCCGAG AAGGGCGCTT TCATGGAACA GTACGCCCGC GAACTGGTGG GGTATACCTA CCTCGAGGAT TGA
|
Protein sequence | MEKLKRYTVK DAEETYLVPQ WAAGFFRVGE DGQLEVTPEG NGGPSASLYE IVSDLRDEGR PLPVLLRFPQ ILAARVVELN EAFRRAIQKY EYKAEYRGLY PVKVNQRRIV VETIAKAGRP YAHGLEAGSK AELALILAQD LHPEAIIACN GFKDDDFIRL ALMGKKLGKN VIITLEKFAE LGRVMRIAKE LGVEPSIGIR YKLKAKGSGQ WEESGGESAK FGLTTPEIIR AVDLLAKAGM LGTIAMLHSH VGSQVTDIRR IKQAVREIAQ TYVQLRKLGA PVRYLNLGGG LAVDYDGSKT AFYASANYTL SEYAEDLVYV TKEVCDGHGE PHPILVTESG RAITAYHSVL VLEVVDTIRP PGEEKLEEPP DAHPVVADMF DLARSISAKN YREVYHDAFS NKDTVQNLYD LGLISLRDRA LAESLFYQIA RKTLKLALEL DYPADELEDL QKMLADKLVC NFSLFQSLPD SWAIKQMFPI VPLNRLDERP TREATLVDIT CDSDGKFDRF IDLHDVRNTL PVHELRPGER YYLGVFLTGA YQDVLGNSHN LFGRIGEAHV TIDEDGYDIE RFVVGEKARR VIEKMGYEDD ELAEAVEKLV RSSKKLTPAE KGAFMEQYAR ELVGYTYLED
|
| |