Gene Mesil_3112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMesil_3112 
Symbol 
ID9252638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus silvanus DSM 9946 
KingdomBacteria 
Replicon accessionNC_014212 
Strand
Start bp3160515 
End bp3163241 
Gene Length2727 bp 
Protein Length908 aa 
Translation table11 
GC content64% 
IMG OID 
Product2-oxo-acid dehydrogenase E1 subunit, homodimeric type 
Protein accessionYP_003686452 
Protein GI297567480 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00950935 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGATCACGG ATACTGAGCT ACTGGAAGCG AGAGCCAGGC TCTCGGCAGA AGAACAGATT 
GCCCTAGAAG ACCTCGAGAC CAAAGAGTGG ATCGAGTCGC TCGAATATGT ACTCCGCTCT
GCCGGGCGCG ACCGGGTGGT GGCGCTGGTG GAGGCGCTCG AGCGCTACGC CTACAAGCAT
GGGGTGATGG TGCCCTACAA GCTGCGCACC CCCTACATCA ATACCATTCC CGCCGATCAC
GAGCCTCCCT ACCCCGGTGA CCTCGAGCTC GAGCGGCGCA TCGCCAACAT CCTGCGCTGG
AACGTCATCG CCATCGTGCA GCAGGCCAAC AAGAAGGCCG AGGGCATCGG CGGGCACATC
TCTACCTACG CCTCTATCGC GGAACTGATG GAGGTGGGCT TTAACCACTT CTTCCGCGGG
CACGGCGCCG GGATGGACCG CGACCTGGTG TTCTACCAAG GGCACATGTC GCCCGGGGTG
TACGCGCGCA GCTTCCTCGA GGGCCGCTTC AGCGAGGATG ACCTGGCCAA GTTCCGCCGC
GACCTTACGC CCGGACCGGG CCGCGTCGTC ACCAGCTACC CCCACCCCTG GCTGATGCCC
GACTACTGGG AGTTCCCCAC CGTCTCCATG GGCCTAGGAC CCATCCAGGC CATTTACCAG
GCCCGCTTCA TGCGCTACTT GGAAGACCGC GGCCTCAAGC CCCGCTCCAG CGCCAAGGTC
TGGGCCTTCT TGGGCGACGG CGAGCAGGAC GAGGTGGAGA CCCTGGGGGC GCTGCGGGTA
GCCGCCACCG AGGAGCTCGA CAACCTCATC TTCGTCATCA ACGCCAACCT CCAGCGCCTC
GACGGGCCGG TGCGCGGCAA CTCCAAGGTG ATCCAGGAGC TGGAGTCGGT CTACCGGGGC
AACGGCTGGA ACGTGATCAA GGTGGTGTGG GGCAGTGCCT GGGACGAGCT GTTGGCCAAG
GACACCGAGG GCGTGCTGCT GGAGCGCTTC GAGCAGCTCG TCGACGGGGA GAGCCAGCGC
TACGCGGCCT ACGGGGCCAA GGAGTTGCGC GAGAAGTTCT TCAACACCCC CGCGCTGAAA
AAGCTCATCG AGGGCTACAC CGATGAGGAT CTCGAGACCC TCACCCTCTC GCGCGGCGGT
CACGACGTGA AAAAAGTTTA CGCCGCCTAT AAAGCCGCCC TCGAGCACCG GGGGAGCCCC
ACGGTGATCA TCGCCCGCAG CGTCAAGGGC TACGGCTTAG GCCCCAGCGC CCAGGCCAAG
AACATCGCCC ACCAGGTCAA GAAGCTCACC CCCGAGGATC TGCGCGAGGC GCGGGACTTC
CTGGGTATCC CGGTCTCCGA TGAGGACCTG GAGAAGACCC CCTTCTACCA CCCCGGCCCC
GACAGCCCCG AGGTGCGGTA CATGCTCGAG CGCCGCGCGG CTCTGGGCGG TCTGATCCCC
GCGCGCAAGG TCAGCTTCAC CCCCCTCAAC ACCCCCGATG CCTCCTTCTT CGAGGAGTTC
TACCAGGGCT CGGGCGGGCG CGAGATCTCC ACCACCATGG CCTTCGTGCG CATGCTGACC
AAGCTGGTGC GCCACCCCGA AGTCGGCAAG TACGTCGTGC CCATCGTGCC CGACGAGGCC
CGCACCTTCG GCATGGAGGG CGTGATCTCC TCGGTGGGTA TCTATAGCCC CAAGGGTCAG
CTCTACGAGC CCGTGGACGC GGGCACGGTG ACGGTCTACC GCGAGTCCAA GACCGGACAG
CTGTTGCAGG AGGGCATCAA CGAGGCCGGG GCCATGGCCA GCTTCATCGC CGCGGGCACC
GCCTACGCCC ACTACGGCAT CCCCACCATC CCCTTCTATA TCTACTACTC GATGTTCGGC
CTGCAACGGG TGGGTGATCT GGTCTGGGCT GCGGGCGACC AGCGCACCAA GGGCTTTTTG
CTGGGGGCCA CCGCCGGGCG CACCACCCTC AACGGCGAGG GATTGCAGCA CGAGGACGGA
CACTCTCACG TGCTGGCCCT TCCGGTGCCC AACATGCCCG CTTATGATCC GGCTTTTGCC
TACGAGTTGG CGGTGATCCT CGAGGAAGGC CTGCGCCGGA TGTACAAAGA GGGGGAGGAC
ATCTTCTACT ACATCCCCTT GATGAACGAG AACTACCCCC AACCCCCCAT GCCGGAACCG
CGCGCAGCAA CCCGCGAGGG CATCTTGCGG GGGATTTATC GCTTCCAGGA GTCCAGCCTT
AAAAAACCCA AGGCCCGGGT GCAACTCTTA GGCTCAGGGA CCATTTTGAA CGAGGTGATC
GAGGCAGCCA AGCTGCTCGA GGGCTATGGG GTCGCCGCCG ATGTGTGGAG TGTGACCAGC
TACAAGGCAC TCTACTACGA TGCCATCGAA GCGGCCCGCT ATAACCGGCT GCACCCCACC
GCCAAACAAC CCAAAAAGGC CTACATCGCC CAAGCCCTAG AAGGCAGTGA GGGCCCCATC
ATCGCCGCCT CGGATTACAT GAAGGCGCTG CCCGAACTGC TCTCGGGCCA CTTGGACCGC
CCCATCCACT CCTTGGGGAC CGATGGCTTT GGCCGTAGCG ATACCCGCCA GGCCTTGCGC
GACTTCTTTG AGGTAGACCG CAACCATATA AGCGTGGCCG CCCTCTACAT GCTTAAACAA
ACCGGTAAGC TCGAGGCCAA GGTGGTGGCT GAAGCAATTA AGCAGCTGGG CATCGACCCC
GAACGGGAGG CGCCGCACAA GCGCTGA
 
Protein sequence
MITDTELLEA RARLSAEEQI ALEDLETKEW IESLEYVLRS AGRDRVVALV EALERYAYKH 
GVMVPYKLRT PYINTIPADH EPPYPGDLEL ERRIANILRW NVIAIVQQAN KKAEGIGGHI
STYASIAELM EVGFNHFFRG HGAGMDRDLV FYQGHMSPGV YARSFLEGRF SEDDLAKFRR
DLTPGPGRVV TSYPHPWLMP DYWEFPTVSM GLGPIQAIYQ ARFMRYLEDR GLKPRSSAKV
WAFLGDGEQD EVETLGALRV AATEELDNLI FVINANLQRL DGPVRGNSKV IQELESVYRG
NGWNVIKVVW GSAWDELLAK DTEGVLLERF EQLVDGESQR YAAYGAKELR EKFFNTPALK
KLIEGYTDED LETLTLSRGG HDVKKVYAAY KAALEHRGSP TVIIARSVKG YGLGPSAQAK
NIAHQVKKLT PEDLREARDF LGIPVSDEDL EKTPFYHPGP DSPEVRYMLE RRAALGGLIP
ARKVSFTPLN TPDASFFEEF YQGSGGREIS TTMAFVRMLT KLVRHPEVGK YVVPIVPDEA
RTFGMEGVIS SVGIYSPKGQ LYEPVDAGTV TVYRESKTGQ LLQEGINEAG AMASFIAAGT
AYAHYGIPTI PFYIYYSMFG LQRVGDLVWA AGDQRTKGFL LGATAGRTTL NGEGLQHEDG
HSHVLALPVP NMPAYDPAFA YELAVILEEG LRRMYKEGED IFYYIPLMNE NYPQPPMPEP
RAATREGILR GIYRFQESSL KKPKARVQLL GSGTILNEVI EAAKLLEGYG VAADVWSVTS
YKALYYDAIE AARYNRLHPT AKQPKKAYIA QALEGSEGPI IAASDYMKAL PELLSGHLDR
PIHSLGTDGF GRSDTRQALR DFFEVDRNHI SVAALYMLKQ TGKLEAKVVA EAIKQLGIDP
EREAPHKR