| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_2046 |
|---|
| Symbol | |
|---|
| ID | 9251559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | - |
|---|
| Start bp | 2046414 |
|---|
| End bp | 2047319 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | phenazine biosynthesis protein PhzF family |
|---|
| Protein accession | YP_003685426 |
|---|
| Protein GI | 297566454 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00628004 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.447072 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAG CCCGAATCCC CTATCTGTTA GTGGATGCCT TCACCGACAC CCCCGGCGGG
GGTAACCGGG TAGCCCTGGT GCTGGATGCG CGGGGGATGT CCTCGGAGGA GATGCACCAG
ATCACCCAGC GGCTCGGGTA CCCGCAGGTG GCCTTCGTCA CCGACTGGCT AGGCGGGAGC
TACTCGGTGC GGTTTTTCAC CCCTAGCGGC GAGGTGGAGT TCGCTGGGCA TGCCGCTATC
GCCTTGGCCC TGACTTTGGT GCGGCAAGGG ATGGCCCGGG AGGGAGAAAC CCGCCTATTC
TTGCGCACTC CGGTGGAAAC CTTGCCGGTG GAACTGGAGT ACGAAGCTGG GGTCCCGGTC
AAGGCGATTT TGCGCGGGCC TTCCCCGCGC TTCCGCGACC CGCCGCAGTG GCGGGATATC
CAGGAGGTGA TGGAGGTACT GGGGGTGGGC GACCGTTACC TGCACCGGGG GTTGCCTTAT
GGGGTAGCTT TTACCGGGCT TTGGTCGCTC TTTTTACCCT TTGTGGCGCC GGGATTAGTG
GACGAGGTAG AGCCAGAGAT GGAGCGGCTG GGGGAGCTCT GTGCCCGGCT CGAGGTCTCC
ACCCTCCACG CCTATGCCCC TCTGGGGCCC CGCACCTTTT ACGCCCGCGA CTTCGCTCCT
CTGTTGGGCA TCCCCGAAGA CCCCGTGACC GGTTCGGCCA ACGCTGCTCT GGGGGCCCTG
CTGGCAAGGG CCGGGGTGGT TCCCCGGCGC GAAGGGGCGG TCAATCTGAC CGTGCTCCAG
GGCCACCGCC TGGGGATGCC CGGAACAGTA GAGGTGCGGG TAGAGTTCAG CGCAGGAGGA
GAACCCTACC GGGTATTTAT CGGAGGGAAA GCCGTCCACA TCGACAGCAG CGGGCTCGAG
CCCTAA
|
|---|
| Protein sequence | MAKARIPYLL VDAFTDTPGG GNRVALVLDA RGMSSEEMHQ ITQRLGYPQV AFVTDWLGGS
YSVRFFTPSG EVEFAGHAAI ALALTLVRQG MAREGETRLF LRTPVETLPV ELEYEAGVPV
KAILRGPSPR FRDPPQWRDI QEVMEVLGVG DRYLHRGLPY GVAFTGLWSL FLPFVAPGLV
DEVEPEMERL GELCARLEVS TLHAYAPLGP RTFYARDFAP LLGIPEDPVT GSANAALGAL
LARAGVVPRR EGAVNLTVLQ GHRLGMPGTV EVRVEFSAGG EPYRVFIGGK AVHIDSSGLE
P
|
|---|
| |