| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_1882 |
|---|
| Symbol | |
|---|
| ID | 9251394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | + |
|---|
| Start bp | 1874961 |
|---|
| End bp | 1877675 |
|---|
| Gene Length | 2715 bp |
|---|
| Protein Length | 904 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | SMC domain protein |
|---|
| Protein accession | YP_003685266 |
|---|
| Protein GI | 297566294 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.600097 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.549876 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACCTC TCAGACTCCG TGTAGAAGGC TTTGGGGCTT ACCTCGAGCC GCAGGAAATC
CTATTTGACG AGGTGGAACT TTTCGCCATC ACCGGCCCTA CCGGCTCGGG CAAAAGCACC
CTTTTGGACG CGATAACCTA CGCACTTTAT AAGGAGACCC CGCGCATAGG GGCCAAGGGG
CTTTCTGAAC TCAAGCACCC CGGTGCGGCC CATACCCGGG TCGAACTCGA GTTCAGCGTG
GCCGAGCAGG TCTGGCGGGT GGTGCGGGTG CTGGGCAAGG AGAACCAGCA CCGGCTTGAG
TACCTCCAAG AGGGAGGCTG GAAGGTACAC CCCTCCTCCG AGAAGGCCAA GACCTTAGAT
GCCCAGATCG CCCATCTGGT CGGCATGGAC TACGGCACCT TCACCCGTGC AATCCTGCTG
CCGCAGGGCC AGTTCGACCT CTTTCTACGT GGAGCGGCCA AGGACCGCCG CGAAACCCTG
ATCAAGCTCT ATGGCCTCGA GCGCCTCAAG GCGATGCGCG AGCGGGTGGG TGAGCACCTG
CGGGAAGCTC GGGAAAAACT GAAGCTGCTC GAGGGCGAGA TGCTGGCTCT GGAAGAGGCC
GAGGAAGGTC GGCTGGAGGC CTTGCGCGAA GAGATCGAAA AGCTCAGGCG AGAAGAAAGC
TCCCTCGAGG CCCAGGTGAC CCAGGCTGAG CGCGACCTCA AGCGGTGTGA GGAACTGGCC
CAGAAGTTCG AGGAGTGGGA GCGCATGCAG CGCACCCTGA AGCGCTTGGA GGTCGAAGCG
ACGGATCTTG CTCAGTTCAA GCTCCGGCTC GAGCGGGCCC AAGCCGCGGA GCGGGTGTTG
CCCCAGGTGG AAGCCTTCGA GGCTGCCCAG CGCGAGGCCC ACCAGGCAAG AACCCACGCC
GATCGGGCAC GCTCCGAGGT TGAAGGGTTG CAGGCCGAGG TGAATAGCCT CAAAGCCAGC
TACGACCCAG CGGCGCTGGA AGCAGCCAAG GCCGAACAGG CTGGACTCCC GGTGCTTGAG
TCGCTGGAGA AATTGCTTAT ACGCCATGGC GGAAACCTGA ATCTCAAGCA TCCCCAGCCC
CTATCCTTCG ATGAAGACCG GCTCGAAGCG TTACGCGAAA CCGAGCGCAC CTGGGCCGAG
GTGAAGAAGC TCGAGGAGCG GCTGGCCAAA CTCGAGGGCG AACTCGCCCA GGATCAAACC
CGCCTGCACA GACGCCAGGC CGAGCGAACC GAGCTCGAGC GGGAGTTGGA ACGCCTCAAG
GCTTTGGGGC AGGAAGCGGC CCGGGTTCAC GAAGCCGCCA AGGCAGCCTT CGAGGCGGCG
CAGCAAAAGG CGGGGGTGTT GGCCCACCGG CACCTGCTTC ACGCAGGAGA ACCCTGCCCC
TTGTGTGAGC AGCCGGTGGC GGTGCTCCCC CCCGAGGCCC CCCTCCCCAA TCTGGAAGGG
TTGCGGCTCG AGCTAGCCCG TACCGACCAG CAGTTGCAGG AGCTGCGCAG CGCCTACCAG
GAGAAGCGCG GCTCGCTCAA GGCCCTCAGC GAGAGCTTGC CCGAGGAAGA GCAGCGGCTC
GCGGCCCGCC AGCAGGAGCG GGACAAGTTG GCCGGCGAAG TGCAACAGAT CAAAGCCAAG
CTCTCCGGTT CGCCGGATTC CCTCGCGGAG GAGCGGGTGC GGATGCTGGC CGGACTGGCC
GCCAAGCTCC GGGCGGCAAC CGGGGGGGAA GCGGTAGGCC ACTTTGAAGC CGCATTGAAG
AAGAAGATCT CCGACCTCGA GGCTACCAAA AGCCGCCTGG AAGGGGTCGA GCAGCGCCTG
GCCGAAGCCC AGCGCAAATA CCTGGCCGCC GAGGAGGCCG CCAAAGCCGC CGAAAGCGGG
CTGGCTCGGC TTGCCGAAAG CCTCTCGCTC TCGCTGCAAA ACGCCGGGTT CGCCCAAGCC
GCCGAGGTGC GCCCGGCCCG GATGCGCCCG GAGGAGCAAC AAGCGCTGGC CGAGCGCATC
GAGAGCTACC AGAAGGATAA AGAATACGTG ACCAAGCGGC TCGAGGTGCT CACCGCCGGA
CTCATCGGGC AGCCGGCGGT AGGGCCGGAG GCGGTGCGGG AGGCGAAGAA CAAGCTAGCC
GAGTTGCGCT CGCAGGCCAA GCTGGCCCAC GGGCGGCGGG TGGGGCTCGA GAGCGATCTA
GAGCGGCTGG AGGGGCAGCT CAAACGCAAA CGCGAGATCC AGGGCGACCA GGCCAAGCTA
AGCCAATCCG TAGACCTATG GGAACGCTTG GCCCGGGACC TTCAAGGCGA CCGCTTCCAG
GACTATCTGC TCGAGCGTTA CCAGGCCGGG CTCTTGCAGC GGGCTACCGA GCTGATGAGC
GAGCTTTCCA GCGGGCGTTA CCGCTTTTGC TTGGATGGGG GGGAGTACGC GGTGGAAGAC
CGCTGGATAC AGGCCATCCG CCCGGTGCGC ACCCTCTCCG GCGGGGAGAG TTTTTTGGCC
TCGCTATCTC TGGCTTTGTC GCTCTCGGAG CACCTCTCGC GGGGTAGGAT CGGGGCGCTA
TTCCTCGATG AAGGCTTTGG GACGTTAGAC GCCGAGACTT TAGAACAGGT GGCGGGGGTT
TTAGAGGCCC TGCCCACCCG AGGCCGCCTG GTCGGGATCG TCACCCACGT CGAGGCCCTA
GCCGAGCGGC TCCCGGCCCG GCTGGTGGTG GACAAGCACC CTTCGGGGAG TCGGTTGCGC
TGGCTCGAGC GTTAG
|
|---|
| Protein sequence | MRPLRLRVEG FGAYLEPQEI LFDEVELFAI TGPTGSGKST LLDAITYALY KETPRIGAKG
LSELKHPGAA HTRVELEFSV AEQVWRVVRV LGKENQHRLE YLQEGGWKVH PSSEKAKTLD
AQIAHLVGMD YGTFTRAILL PQGQFDLFLR GAAKDRRETL IKLYGLERLK AMRERVGEHL
REAREKLKLL EGEMLALEEA EEGRLEALRE EIEKLRREES SLEAQVTQAE RDLKRCEELA
QKFEEWERMQ RTLKRLEVEA TDLAQFKLRL ERAQAAERVL PQVEAFEAAQ REAHQARTHA
DRARSEVEGL QAEVNSLKAS YDPAALEAAK AEQAGLPVLE SLEKLLIRHG GNLNLKHPQP
LSFDEDRLEA LRETERTWAE VKKLEERLAK LEGELAQDQT RLHRRQAERT ELERELERLK
ALGQEAARVH EAAKAAFEAA QQKAGVLAHR HLLHAGEPCP LCEQPVAVLP PEAPLPNLEG
LRLELARTDQ QLQELRSAYQ EKRGSLKALS ESLPEEEQRL AARQQERDKL AGEVQQIKAK
LSGSPDSLAE ERVRMLAGLA AKLRAATGGE AVGHFEAALK KKISDLEATK SRLEGVEQRL
AEAQRKYLAA EEAAKAAESG LARLAESLSL SLQNAGFAQA AEVRPARMRP EEQQALAERI
ESYQKDKEYV TKRLEVLTAG LIGQPAVGPE AVREAKNKLA ELRSQAKLAH GRRVGLESDL
ERLEGQLKRK REIQGDQAKL SQSVDLWERL ARDLQGDRFQ DYLLERYQAG LLQRATELMS
ELSSGRYRFC LDGGEYAVED RWIQAIRPVR TLSGGESFLA SLSLALSLSE HLSRGRIGAL
FLDEGFGTLD AETLEQVAGV LEALPTRGRL VGIVTHVEAL AERLPARLVV DKHPSGSRLR
WLER
|
|---|
| |