| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5568 |
|---|
| Symbol | |
|---|
| ID | 9249471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014211 |
|---|
| Strand | - |
|---|
| Start bp | 771678 |
|---|
| End bp | 772208 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, PadR-like family |
|---|
| Protein accession | YP_003683453 |
|---|
| Protein GI | 297564480 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.630063 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.41654 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTAC GACACGCCAT ACTCGGGCTC CTGTCCATCA AGCCGATGAG CGGCTACGAC
CTGAAGAAGG TGATCGACGA GAGCGTCGGG CACTTCTGGA CGGCGGACCA GTCGCAGATC
TACCGGACGC TCACCGGCCT GGTGGAGGAG GGCCTGGCCT CCCGCCGCAC CGTGGTGCAG
GAGGAGCGCC CCAACCTGCA CCTGCACAGC GTGACCGCCC CCGGGCTGGC CGAACTGGAC
CGCTGGCTCA CCTCCCCCCC GCGCACCCCG CCGACCCGGG ACCCCTTCCT GGCACGGCTG
TTCTTCGCGG ACAGAATGCG CACGGAGGAC ATCCGGGAAC TGCTGGACAC CCGCAGGCGG
GAGGTGGGCG GGGAGCTGGC CGCGCTGGAG GCGATCGCCG TCCCGGCGGA GGCCGCCGGG
CTCGGGCAGG CGCTCCGCCT GGCCACGCTC TCCTACGGCA TCACCCTGGC CAGGGCGGAG
CTGGACTGGC TCGACGCCAC CGAACGGCTG CTGGAGGAGG ACACCCCGTG A
|
|---|
| Protein sequence | MSLRHAILGL LSIKPMSGYD LKKVIDESVG HFWTADQSQI YRTLTGLVEE GLASRRTVVQ
EERPNLHLHS VTAPGLAELD RWLTSPPRTP PTRDPFLARL FFADRMRTED IRELLDTRRR
EVGGELAALE AIAVPAEAAG LGQALRLATL SYGITLARAE LDWLDATERL LEEDTP
|
|---|
| |