Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_5480 |
Symbol | |
ID | 9249383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | + |
Start bp | 674686 |
End bp | 675900 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_003683365 |
Protein GI | 297564392 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.500623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGATC ACGGCACGCC CTCCGCCGAG TACACGGCCT CCGACCGGGA GGGCGACCGC AGGGTCCGCT TCGCCCGGCG CATCGTCATC GTCTCGGTGG GCTTCACCGC GCTGCTCGTC GTGGGGATGC CCCTGGTGGA CGTCGTCACG GCCGCGGCCT CGGACTGGCC CCTGTGGCGC TCCCTGACCG GGGTGGTCGC CTCCGTGCCG ATCGCCGTGC TGCTGATCGT GATGCTCCGG GCCAGGCTGG ACGGTCGGCG CAAGCCGGAC CCGCGCGCCT ACTGGACCTC GCTCGGCCTG ATCGTCGTGG TCGTCCTGTG CCTCCAGGAG CCGATCAACA CCGTGTTCTT CCTGGCCGCG TGGTGGGGGA CCGGGGTCTT CCTCGCCCCG CGCAGGCGCA GCGCGTACGT CACAGCCGCC CTGCTGGCGC TGCCCTGGCT CGCGGTCCCG TTCTACGGGT TCGAGACGCA GTTCCAGCCG CTCCTCTACC TGCTGGTGTG GCTGGTGATG GTCTTCAGCG GGCTGATGTT CGCCGGGGCC TCGCTCTCCA TGATCTGGCT GTGGGACATC AGCCGCGAGG CCGTCGCGGG ACAGCGGGCC CGCGCCCAGC TCGCGGTGAG CGAGGAGCGG CTCCGCTTCG CCCGCGACAT GCACGACCTG CTCGGGCACA GCCTCTCCGC GCTCGCGGTC AAGGCCCAGC TGGCCGGACG GCTCGTGGAG CGGGACCCCG AGCGGGCGGG CGCGGAGATG GCGGAGGTGC AGGTGCTCGC CAGACAGGCG CTCCAACAGG TGAGGTCGGC GGTCAGCGGC TACCGGGAGG TCGACCTGGC GGGCGAGACG GAGGCCGTCC GCGCGGTGCT CGACGCGGGG GGAACCAGGG CGGTCGCCAC CGGGCTGGAG GGGCTGGACC TGCCGCCGCG GACCGCCGCG CTCGCCGCCT GGGTGGTGCG CGAGGGCGGC ACGAACGTCC TGCGGCACAG CGACGCCAAC GAGTGCCAGA TCAGCTTCAC CCTCGCCCGC GACAGCGCCG TGGGCCCCCG GACGCTCGTG GTCGAGGTGT TCAACGACCG CGCCCGGGGC GGCGGCCAGG ACGGGAGGGA GTCGGGCAAC GGGCTCGCCG GTCTGTCCGA GCGGGTCGCC ATGGGCGGCG GCACCCTCTC CGCGGCCCGC ACTCCGGAGG GGGGCTTCCT GCTCCGCGCC GTCCTGCCGC TCTGA
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Protein sequence | MSDHGTPSAE YTASDREGDR RVRFARRIVI VSVGFTALLV VGMPLVDVVT AAASDWPLWR SLTGVVASVP IAVLLIVMLR ARLDGRRKPD PRAYWTSLGL IVVVVLCLQE PINTVFFLAA WWGTGVFLAP RRRSAYVTAA LLALPWLAVP FYGFETQFQP LLYLLVWLVM VFSGLMFAGA SLSMIWLWDI SREAVAGQRA RAQLAVSEER LRFARDMHDL LGHSLSALAV KAQLAGRLVE RDPERAGAEM AEVQVLARQA LQQVRSAVSG YREVDLAGET EAVRAVLDAG GTRAVATGLE GLDLPPRTAA LAAWVVREGG TNVLRHSDAN ECQISFTLAR DSAVGPRTLV VEVFNDRARG GGQDGRESGN GLAGLSERVA MGGGTLSAAR TPEGGFLLRA VLPL
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