Gene Ndas_5413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5413 
Symbol 
ID9249316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp593247 
End bp593726 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content69% 
IMG OID 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_003683298 
Protein GI297564325 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCG ATTTCTCGAT CTCCCTCCCA AGGCAGGCGT ATACGGTCGC CGTCGCCCGC 
GATGTCCTGG GCACCCTCCT CGTTCGCGCG GGAGTGTGCG GGGACTGCGT CGACGACATC
CTCCTGGCCG TCTCCGAGGC CTGTGCCAAC GCGATCGACC ACGGCGGGCC GGCCCGTGAC
TACAGGGTCG AGGCGGAGAT GGGCGGGCGA TGGTGTGAAC TGCGGATATC CCATACCGGG
AGAGCGCCCG ATCCCGTGGC GCTCGCGGAG CGGTTCACCA CCGACCACAC GCCCCTCCCC
GGTCTGGAAG CGGAATCGGG CAGGGGCATT CTGTTGATGC GCTACCTCAT GGACGAGGTC
GCCTTCGAGG GGGAACCAAG GACCACGGTC CTGCTGCGCA AGCGGCTCAC GGCTTGCGAC
GGACCGCCGG AGGAGAGCGC CGCCGATCAG GTGCCGGCCC AGCGCTACGC CCTGATGTGA
 
Protein sequence
MDADFSISLP RQAYTVAVAR DVLGTLLVRA GVCGDCVDDI LLAVSEACAN AIDHGGPARD 
YRVEAEMGGR WCELRISHTG RAPDPVALAE RFTTDHTPLP GLEAESGRGI LLMRYLMDEV
AFEGEPRTTV LLRKRLTACD GPPEESAADQ VPAQRYALM