Gene Ndas_5402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5402 
Symbol 
ID9249305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp580807 
End bp581574 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content75% 
IMG OID 
Product3-oxoadipate enol-lactonase 
Protein accessionYP_003683287 
Protein GI297564314 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGA TTCCGCTCCA GTACCGGCTC GACGGACCCC GGCACGCGCC CGTCGTACTG 
CTCGTGCCGC CCTTCGGCAC CACGATGTCG GTCTGGGAAC CGCAGCTGCC CGAACTCACC
CGCGACCACA GGGTCCTGCG GGTCAACCAC CGGGGGCACG GCTCCTCTCC GGCCCCGGAG
GGCCCCTACA CCGTCGAGGA ACTCGCCCTG GACCTGCTCG GAGTCCTGGA GGCCCAGGGC
CTGACCCGGG TCCACGCGGT GGGCGCCGGG CTCGGCGGGG CGCTGCTGGT GTGGATCGCG
GCCAACTCGC CGCGCACCCT GGAACGCCTC GTGCTGCTGG CCGCGGCGCC CCGCACCCCG
CGGACGCACC GGTGGGACCT CCTCGCCTCC CGGGTGCGCT CGTCGGGCCT GGACTCGGTG
ACCGCGGACG TGGTGCGGCC CTGGTTCACC CCGGACATGG GCGAGGAGCG GCCGCGGGTC
GTGGCCCGGC TGACCGAGGA GTTCGGCGGG CTCGACCCGG AGGGCTTCGC CGCGGTCTGC
GACGCCGTGG CCGGGATGGA CCAGCGCCAC CTGGTGGCCT CCGTGCGGGT GCCGACCCTG
GTGGTGTCGG CCGCCCACGA CCCGATGCTG CCGCCCGGCC ACGGCCGGAG GCTGGCGGAC
GGGATCCCCG AAGCCCGGTT CGAGGTGGTC TCCGGCGCCG CGCACCTGCT CGGGGTCGAG
CGCGCGGACC GGGTGAACGA GCTGCTGTTG GAGCACCTGT CCGGCTGA
 
Protein sequence
MTLIPLQYRL DGPRHAPVVL LVPPFGTTMS VWEPQLPELT RDHRVLRVNH RGHGSSPAPE 
GPYTVEELAL DLLGVLEAQG LTRVHAVGAG LGGALLVWIA ANSPRTLERL VLLAAAPRTP
RTHRWDLLAS RVRSSGLDSV TADVVRPWFT PDMGEERPRV VARLTEEFGG LDPEGFAAVC
DAVAGMDQRH LVASVRVPTL VVSAAHDPML PPGHGRRLAD GIPEARFEVV SGAAHLLGVE
RADRVNELLL EHLSG