Gene Ndas_5341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5341 
Symbol 
ID9249244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand+ 
Start bp516783 
End bp517706 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content69% 
IMG OID 
Productband 7 protein 
Protein accessionYP_003683227 
Protein GI297564254 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.207546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.117184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGA TCATCATCGT GGCGCTTTTC GTCGCGGTTC TTCTGCTCGT CTTCTGGCGG 
AGCGTGCGTA TCGTCCCGCA CTCGATGGAG GACGTCGTCG AGCGTTTCGG TAAGTTCCAC 
CGGACGTTGA GCTCGGGTTT CAACATCGTC ATCCCCGGTG TGGACCACGT GCGCGAACGC 
ATCGACCGCC GCGTCCAGGT CGTGAGCTTC CCGCCGCAGT CGGCCATCAC CGAGGACAAC 
CTCGCGGTCG AGGTCGACTC GGCGGTCTAC ATCAGGGTCG TGGACGCCTA CCGGGCCACC 
TACGAGGTGG CCAACTTCAT CCAGGCCGTC GAGCAGCTGA CCCTGGCCAC GCTGCGCAAC 
GTCATCGGCG GCATGAACCT GGAGGGGACG CTCACCTCCC GGGACGCGAT CAACCGCGAG 
CTGAAGGCCG TGCTGGACGA GGCCACCAGC GACTGGGGCA TCGAGATCAG CCGCATCGAG 
CTCAAGGGCA TCGAGCCGCC GTCCTCCGTG CAGGAGGCGA TGGAGATGCA GATGCGCGCC 
GACCGCGAGA AGCGCGCCCA GCTGCTCAGC GCCGAGGGCG AGAAGCAGTC CGCGGTCCTG 
CGCGCCGAGG GTGAGCGCTC GGCCGCGGTG CTGCGGGCCA GGGGCGCGGC CGAGGCGCAG 
GCGCTCACCT CCAAGGCCGA CGCCGAGGCA CAGACCACCC GGGCCCGCGG TGAGGCCGAC 
GCCATCCACA TGGTGTTCAA GGCCCTGCAC ACCAGCCGGG TCGACCCGGA CGTGCTGGCC 
TACCACTACC TCCAGAAGCT CCCGGAGATC GCCCGGGGCG ACGCCAACAA GGTGTGGGTC 
GTCCCGGCCG AGATGGGCCA GGCGCTCAAG GGGGTCAGCG CCGCGTTCGA CCGGCTGCGC 
GACGACGTGG TCCGGGCCCC CTGA
 
Protein sequence
MTMIIIVALF VAVLLLVFWR SVRIVPHSME DVVERFGKFH RTLSSGFNIV IPGVDHVRER 
IDRRVQVVSF PPQSAITEDN LAVEVDSAVY IRVVDAYRAT YEVANFIQAV EQLTLATLRN 
VIGGMNLEGT LTSRDAINRE LKAVLDEATS DWGIEISRIE LKGIEPPSSV QEAMEMQMRA 
DREKRAQLLS AEGEKQSAVL RAEGERSAAV LRARGAAEAQ ALTSKADAEA QTTRARGEAD 
AIHMVFKALH TSRVDPDVLA YHYLQKLPEI ARGDANKVWV VPAEMGQALK GVSAAFDRLR 
DDVVRAP