| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5334 |
|---|
| Symbol | |
|---|
| ID | 9249234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014211 |
|---|
| Strand | + |
|---|
| Start bp | 501525 |
|---|
| End bp | 503978 |
|---|
| Gene Length | 2454 bp |
|---|
| Protein Length | 817 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | V-type H(+)-translocating pyrophosphatase |
|---|
| Protein accession | YP_003683220 |
|---|
| Protein GI | 297564247 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0178305 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCTGGGC TCAACCTCGC CGCTGAAGGC GGCATGGCCC TATCACTGGC AGGCACCGAC
TTCACCCTCG TCATCATCGT CATGGTGGTG GCCCTTCTGG CACTCGCCGT CGCGGGCGTG
CTGGTACGTG AGGTCCTCGC CGCAGGGCAG GGCACAGAGC GAATGCGCGG CATCGCGCTC
GCGGTGCAGG AAGGAGCGGC GGCCTACCTC AAACGACAGT TCCGCACCCT CGCGGTCTTC
GTCGTCCTCA TCCCGCTCCT GCTGCTCCTG CTCCCCGCCG ACTCGTGGGC CATCGCGATC
GGCCGGTCGG TCTTCTTCGC CCTCGGCGCC CTGCTGTCGG CGGCGACCGG ATTCATCGGC
ATGTGGCTCG CCGTGCGCGG CAACGTCCGG GTCGCCGCGG CCGCCCGGGG CGGTGACGAC
GCCTCCAATC GCACCGCCAT GCGCATCGCC TTCCGGACCG GCGGAGTGGC GGGCATGATC
ACCGTCGGCC TCGGCCTGTT CGGCGCGGCC CTCGTCGTCC TCCTCTACCG GGGCGACGCC
CCCATCGTCC TGGAGGGCTT CGGCTTCGGC GCGGCCCTCC TCGCCATGTT CATGCGCGTG
GGCGGCGGCA TCTTCACCAA GGCCGCCGAC GTCGGCGCCG ACCTCGTCGG CAAGGTCGAG
CAGGGCATCC CCGAGGACGA CCCCCGCAAC GCCGCCACCA TCGCCGACAA CGTCGGCGAC
AACGTGGGTG ACTGCGCCGG CATGGCCGCG GACCTGTTCG AGTCCTACGC GGTCGTGCTC
GTCGCCTCGC TGATCCTCGG CCGCGTCGCC TTCGGCACCG AGGGACTGGT GTTCCCGCTC
CTCGTCCCCA TGATCGGCGT GCTCACCGCC ATCGTCGGCA TCTTCCTGGT CGCCCCCCGC
GCCAGGGACA AGACGGCGAT GTCGGCGATC AACCGCGGGT TCTTCATCTC CGCGGCGATC
TCCGCCGTGC TCGTCGTCGG CACCGCCTTC TGGTACCTGC CCTCCAGCTT CGACCAGCTC
TCCGGCGTCA GCCCGCAGGT CCTGGCCGAG ATCGAGGAGG CCGGGACCAA CCCGGACCCG
AGGATCCTCG CGGTCGCGGC GGTCCTCATC GGCCTCGTGC TCGCCGCCGC CATCCAGCTG
CTCACCGGCT ACTTCACCGA GACCGACCGG CGCCCCGTCC GCGAGATCGG CGACAGCTCC
GAGACCGGCG CGGCGACCGT CATCCTCTCC GGCATCTCCG TCGGCCTGGA GTCGGCCGTC
TACTCCGCCC TCCTCATCGC CGGAGCCGTC TACGCCGCGT TCCTGCTCGG CGGCGGCTCC
ATCACCCTGA GCCTGTTCGC CGTCGCCCTC GCCGGAACCG GCCTGCTCAC CACCGTCGGC
ATCATCGTGG CGATGGACAC CTTCGGCCCC GTCTCCGACA ACGCCCAGGG CATCGCGGAG
ATGTCCGGCG ACGTGGAGGG CCCGGGCGCG GAGATCCTCA CCGGGCTCGA CGCCGTCGGC
AACACCACCA AGGCCATCAC CAAGGGCATC GCGATCGCGA CGGCGGTCCT GGCCGCGACC
GCGCTCTTCG GCGCCTTCCG CACCTCCGTG CAGGCCCAGC TCGGCGACGC CGACGAGGCG
TTCTCGCTCT CACTGGACCA GCCCGACGTG CTCGTCGGCG TCATCATCGG CGCCAGCGTG
GTGTTCTTCT TCTCCGGGCT CGCCATCATG GCGGTCGGCC GGGCGGCGGG CCGCGTGGTC
ATGGAGGTGC GCGACCAGTT CCGCACCCGT CCGGGGATCA TGGACGGCAC GGAGAAGCCC
GAGTACGCGC GCGTGGTCGA CATCTGCACC AAGGACTCGC TGCGGGAGCT GGTCACCCCG
GGCCTGCTGG CCGTCCTCGC GCCGATCGCG GTCGGCTTCG CCCTCGGCTA CGCCCCGCTC
GGCGCGTTCC TGGGCGGCGC CATCGCCGCG GGAGTGCTCA TGGCCGTCTT CCTGTCCAAC
TCGGGCGGGG CCTGGGACAA CGCCAAGAAG CTCGTCGAGG ACGGCCACCA CGGCGGCAAG
GGCTCGGAGG CCCACGCCGC CACGGTCATC GGCGACACGG TCGGCGACCC CTTCAAGGAC
ACCGCGGGTC CCGCCATCAA CCCCCTGCTC AAGGTGATGA ACCTCGTCGC CCTGATCGTG
GCGCCCAGCG TGGTGATCTA CGCCGACAAC GTCGTCCTGC GGGCGGGGAT CGCGGTGGCG
GCCGTCGCCG TGCTCGTCGG CGCCATCCTG TGGTCCAAGC GCCGCGGGGG AGGCACCGAG
ACCGACCTCG CCGAGACCGG CGGCCGGTCC GCGCCCAAGG GCGCCCCGGA GACCGGAGGC
GGAGCCCCGC CGAAGGGTGA GGTCTCCCCT GCCGGGGACG GCGGTGTCGG CGGGGACGCC
GCGGACGGCG CCGACGACCG CAAGGAGGAG GCCCGCGCCG GAGAGGGGAA GTAG
|
|---|
| Protein sequence | MSGLNLAAEG GMALSLAGTD FTLVIIVMVV ALLALAVAGV LVREVLAAGQ GTERMRGIAL
AVQEGAAAYL KRQFRTLAVF VVLIPLLLLL LPADSWAIAI GRSVFFALGA LLSAATGFIG
MWLAVRGNVR VAAAARGGDD ASNRTAMRIA FRTGGVAGMI TVGLGLFGAA LVVLLYRGDA
PIVLEGFGFG AALLAMFMRV GGGIFTKAAD VGADLVGKVE QGIPEDDPRN AATIADNVGD
NVGDCAGMAA DLFESYAVVL VASLILGRVA FGTEGLVFPL LVPMIGVLTA IVGIFLVAPR
ARDKTAMSAI NRGFFISAAI SAVLVVGTAF WYLPSSFDQL SGVSPQVLAE IEEAGTNPDP
RILAVAAVLI GLVLAAAIQL LTGYFTETDR RPVREIGDSS ETGAATVILS GISVGLESAV
YSALLIAGAV YAAFLLGGGS ITLSLFAVAL AGTGLLTTVG IIVAMDTFGP VSDNAQGIAE
MSGDVEGPGA EILTGLDAVG NTTKAITKGI AIATAVLAAT ALFGAFRTSV QAQLGDADEA
FSLSLDQPDV LVGVIIGASV VFFFSGLAIM AVGRAAGRVV MEVRDQFRTR PGIMDGTEKP
EYARVVDICT KDSLRELVTP GLLAVLAPIA VGFALGYAPL GAFLGGAIAA GVLMAVFLSN
SGGAWDNAKK LVEDGHHGGK GSEAHAATVI GDTVGDPFKD TAGPAINPLL KVMNLVALIV
APSVVIYADN VVLRAGIAVA AVAVLVGAIL WSKRRGGGTE TDLAETGGRS APKGAPETGG
GAPPKGEVSP AGDGGVGGDA ADGADDRKEE ARAGEGK
|
|---|
| |