Gene Ndas_5280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5280 
Symbol 
ID9249178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp446300 
End bp447361 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content47% 
IMG OID 
Productprotein of unknown function DUF262 
Protein accessionYP_003683166 
Protein GI297564193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGGGCA GCACTCCGCA GCACTACACA ATAGCAGATT TCCTTAAATG GAATGACGAC 
CATGAGCTTG TACTAAATCC AAAGTTCCAA CGCGGACCAG TATGGCCCTC AGCGGCTAGG
ACTTATCTGA TTGACTCTAT TATCAGAGGA TACCCCATAC CCAAACTCCT CATTAGGACA
AAAGTGGATA GAGCTACACG GCGCACCATT AGAGATGTAG TTGACGGGCA ACAAAGGCTC
CGCACAATAA TTGATTTCGC CTCTGACAAA CTGGTCCTAG GCCCCAAGGC GGGAGAGTTC
AAAGGGAAAA GATACCGCGA CCTGGAAGAC GAACAGCAGG ATGACTTCTT GTCCTATAAG
TTGACATGCG AGCAGCTCAT CAATGCAAGC GACGAAGATG TGCTCGAAGT TTTTGTAAGA
ATCAACTCCT ACGCTGTCCC TGTAAACGAG CCTGAGCTTC GAAATGCTCG TTTTGATAAT
GCATTTAGCG ATCTTGTTAA GAATATTGTC CGACGAGTTA CACCCGTATG GGAAGCTGGC
GTCATCTCCC CGCGTGAGCG CGTAAGGATG GCAGACCAAT CCACTATTGC TGAAGTAATC
GGATACTTCA TCGAAGGTGT GAGAGATGGC GGAGAGTCCC AGATCACAAA GATATACGAG
AATCACAAAG ACGACTCATT GGAAGATCTT CCTCCCCAGG AAAAAGTGAC TAACGTATGC
CTAGAAACTG CCCAACTACT GGAAGACCTA GCCAACGAAC CGATCGCACA AAGACCACAC
TTTCTAATGC TAGCGGCAGC AGTTATGTAT GCGAAAAACG AACTCCCAGA AGGAAAAATA
GACTTTAGTA GAATCCCCCC AAAAGAGAAC CTACTCCGAA ACAAGGATAA TGCTGTCAAT
AGCCTAAAAG AGTTGAACAT CGCATTCTCA ACACCACTGG AAGATCTCCC TAGCAATCTG
AACCTATTTG TCGATGCGCG CTCAACTACA CAACGCATGC GAAGTCGACA AACACGTTTT
GAATACTTCT GCCGCGCACT GACAGGAGAA TCATTTTTCT AG
 
Protein sequence
MKGSTPQHYT IADFLKWNDD HELVLNPKFQ RGPVWPSAAR TYLIDSIIRG YPIPKLLIRT 
KVDRATRRTI RDVVDGQQRL RTIIDFASDK LVLGPKAGEF KGKRYRDLED EQQDDFLSYK
LTCEQLINAS DEDVLEVFVR INSYAVPVNE PELRNARFDN AFSDLVKNIV RRVTPVWEAG
VISPRERVRM ADQSTIAEVI GYFIEGVRDG GESQITKIYE NHKDDSLEDL PPQEKVTNVC
LETAQLLEDL ANEPIAQRPH FLMLAAAVMY AKNELPEGKI DFSRIPPKEN LLRNKDNAVN
SLKELNIAFS TPLEDLPSNL NLFVDARSTT QRMRSRQTRF EYFCRALTGE SFF