| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5250 |
|---|
| Symbol | |
|---|
| ID | 9249147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014211 |
|---|
| Strand | - |
|---|
| Start bp | 411796 |
|---|
| End bp | 413145 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | protein serine/threonine phosphatase |
|---|
| Protein accession | YP_003683136 |
|---|
| Protein GI | 297564163 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.383211 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATCG CTCTCCGATA CGCGGCGTAC TCCGACGTAG GATGCCTCCG CGAAGGCAAC
GAAGACTCCG GCTACGCCGG CCAGAACCTC CTCGCGGTCG CCGACGGCAT GGGCGGTTAC
GCCGGCGGCG AGGTGGCCAG CTCCATCGCG ATCTCCTCGA TCCGCCGCCT CGACTCCGAG
CCGCCCCGGT CCGACGAGAT GGCCGAGGTG CTCCAGCGCG CCGTCGAGCA GGCCAACGCC
TCCCTGTCGC GCAGGATCAT GGAGGAGCCC CAGCTGGAGA ACATGGGCAC CACCCTGACG
GCCATGCTCT GGGCCGGTCC GCGGGTGGCG CTCATCCACA TCGGCGACTC CCGCGCCTAC
CTCATGCGCG GCCCCCGCTT CGAGCAGATC ACCCACGACC ACACCCTGGT GCAGACCCTG
GTGGACGAGG GCAAGATCAC CGAGGAGGAG GTCGCCACCC ACCCGCAGCG CTCCCTCATC
CTGCGCGCCC TGGACGGCAA GAGCCCGGTC GACCCCGACA TCTCCATCAG CGAGGCCAAG
GCGGGCGACC GCTACCTGCT CTGCTCCGAC GGGCTCTCCG GCGTGGTCAG CAAGAAGACC
ATCCACGAGA CCCTCGCCAC CGAGGCCGAC CCGCGCAGCG CGGCCAAGAA GCTCATCGAG
CTGGCCATCC GCGGCGGCGG CCCGGACAAC ATCACCGCGG TCGTCGCCGA CGTCATCGAG
GCCGAGACCG ACAGCGAGGG GCCCACCCGC GCCTCCCAGG TGGTCGGCGC CGCGGACCAG
CGCCGCGAGA ACGTCGACCA GGGCAACGAC ACACCCGCCA GACGGGCGCA GGAACTGCGC
GGGGGATCCG GCGACACCGC CGAGATGGAC CCCGTCCGTG ACGAGCCCGG CCCGGACGCC
TACGCCTCGG GCGGCGCCTA CCAGGAGTCC TACAACGGCG ACTACGACGA CTACGAGGCC
CCGCCGGCCG ACCGGCGGGG CCGTCCCGAA CCCGAGTACC GCCGCAGGCG CTGGTGGCCG
ATGGTGCTGG TGTTCCTGGT CGTGGTCGCC GTCGTCGCGG GGGCCACGTA CTACTTCGGC
AGCCGCTACG TGAACAGCCA GTACTACGTG GGCCCCTCCC CCTCGGGGGA CACCGTCAGC
ATCTACCAGG GCATCAACAC CGACATCGCG GGCTTCAGCC TGTCGGAGGA GGTGGAGGAG
ACCGGGATCA CCCTGGACTC GCTCTCGGAG GCCGACCGCG GATCGGTGGA GAACACCCTG
CCCGCGGAGA GCCTGGACGA CGCCCGGGCG AGCGTGGACG TGCTGAGCGA GGGTACGGCC
GGGGCCCGGA CCGAGGAAGG GTCCGGGTGA
|
|---|
| Protein sequence | MTIALRYAAY SDVGCLREGN EDSGYAGQNL LAVADGMGGY AGGEVASSIA ISSIRRLDSE
PPRSDEMAEV LQRAVEQANA SLSRRIMEEP QLENMGTTLT AMLWAGPRVA LIHIGDSRAY
LMRGPRFEQI THDHTLVQTL VDEGKITEEE VATHPQRSLI LRALDGKSPV DPDISISEAK
AGDRYLLCSD GLSGVVSKKT IHETLATEAD PRSAAKKLIE LAIRGGGPDN ITAVVADVIE
AETDSEGPTR ASQVVGAADQ RRENVDQGND TPARRAQELR GGSGDTAEMD PVRDEPGPDA
YASGGAYQES YNGDYDDYEA PPADRRGRPE PEYRRRRWWP MVLVFLVVVA VVAGATYYFG
SRYVNSQYYV GPSPSGDTVS IYQGINTDIA GFSLSEEVEE TGITLDSLSE ADRGSVENTL
PAESLDDARA SVDVLSEGTA GARTEEGSG
|
|---|
| |