Gene Ndas_5244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5244 
Symbol 
ID9249141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand+ 
Start bp403697 
End bp404617 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content72% 
IMG OID 
ProductRhomboid family protein 
Protein accessionYP_003683130 
Protein GI297564157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.159225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.00568338 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGCAT CCCCACCGCC GTCCGGAGCG GCTCCGGAGC CGGAGCGCCC GGCCCCGCGC 
ACCTGCTACC GCCACCCCGA CAGGGAGACG GGGGTCAGCT GCAGCAGGTG CGAGCGGCCG 
ATCTGCCCGG ACTGCATGGT CGAGGCGTCC GTGGGCTTCC AGTGCCCCGG GTGCGTCTCG 
GAGGGGAACC GCGGGGTGCG CCGGGCCAGG ACCGCCTTCG GGGGCAGGGC CGTCGCCAAG 
CCGTACGTCA CCTGGACGAT CCTCGGCATG ATGGCGGCCG GGTTCCTCGC CCAGCTGGGT 
ACGTCCACCC CGATCGGGCA GGCGGGCGCC TCGCCGCTGG TCTGGGAGTT CGCCATGCTC 
GGCATCGGCC GGGTCGAGGA CGGAACCCTG CTCGGGGTGC TCCCGGGCGA GTGGTACCGG 
CTCCTCACGG CCGCGTTCCT GCACGGCAGC ATCTTCCACC TGCTGTTCAA CGGGTACGCC 
ATGTACCTGC TGGGAACGCA GCTGGAGCGC TGGCTGGGAC ACGTCCGCTT CCTGACCCTG 
TGGGTGCTCG GCGCGTTCGC GGGATCGGTG CTCAGCCTCC TGGCGGAGCC CAACCAGTTC 
TCGGTCGGCG CCTCCGGAGC GATCTTCGCC CTGTTCGGGG CGGTGCTCGT CATCGGCAGG 
CGGCTGCGCC TGGACCTGCG CATGATCGGC GTCCTGCTGG TGGTCAACCT CGTGCTGACC 
TTCGTGGTCC CCAACATCTC GTGGACCGCG CACATCGGCG GGCTGGTCGC CGGGCTCGCG 
CTCGGCGCCG TGTTCGCCTA CCTGCCCGGC AGGTCCGCCG GAAACCGTGC CCGTACGGTC 
ACGCACGTCC TGCTGGCGGC GGCGTTCGCC GCCCTGCTCG TGGCCCTGGT GGTCACGGCG 
CCGCTGATCA TCCTCCGCTG A
 
Protein sequence
MTASPPPSGA APEPERPAPR TCYRHPDRET GVSCSRCERP ICPDCMVEAS VGFQCPGCVS 
EGNRGVRRAR TAFGGRAVAK PYVTWTILGM MAAGFLAQLG TSTPIGQAGA SPLVWEFAML 
GIGRVEDGTL LGVLPGEWYR LLTAAFLHGS IFHLLFNGYA MYLLGTQLER WLGHVRFLTL 
WVLGAFAGSV LSLLAEPNQF SVGASGAIFA LFGAVLVIGR RLRLDLRMIG VLLVVNLVLT 
FVVPNISWTA HIGGLVAGLA LGAVFAYLPG RSAGNRARTV THVLLAAAFA ALLVALVVTA 
PLIILR