| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5238 |
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| Symbol | |
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| ID | 9249134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014211 |
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| Strand | + |
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| Start bp | 398072 |
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| End bp | 398992 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | helix-turn-helix domain protein |
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| Protein accession | YP_003683124 |
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| Protein GI | 297564151 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000759311 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTAGGTG GCGTGTTTCG CTGGTGGTAC ACCTCCGCCA CTCTGCGTCA TGGGATCATC
GTTATGACCA GCCCCACGGT CCGTCGTCGA CGGCTGTCCG CCGAACTCCG CCGCCACCGC
GTACGGGCGG GTATGACCCT CAGCGACGTC GCGGACGAGC TGGAGTGGTC CCCGGCCAAG
CTCGGACACA TCGAGACCGG CATCCGCAAG TGGCCGTCGG TCATGGAGAT CTCCGCCCTC
CTGCGCCTGT ACGGCGTCAC CGGAGGGCAG CGGGAGGCCA TCCTGACCCT CGTCCGGGAG
TCGCGCCTGC GCCCCTGGTG GACCGAGTAC GAGGACGTCC TGTCCTCCGC GTACGTGGGC
AACGAGGCGG GCGCCGTCTC CGTGCAGTCC TACGCGGGCA TACTCGTCCC CGACCTCCTC
CAGGTGCCCG ACTACACCGC GGCGGTGGCG CGGGCCCTGG GCCACGGCGA GCGCACCGTC
GAACGCATGG TGGCCGCCTA CCTCAAGCGC CAGGAGGTCC TGGACCACGG CGGCCCCGAC
CTCGGTTCCT CCGGAAGCCT CGTCCGCTAC CACGCCATCG TCGAGGAGGA CGCCCTCCAG
CGGGTGTCCG GGAACCGAGA ACTGCTGCGT GCGCAGACCA GCCGCATCGT GGAGTTGGCC
ACCGGGTCCG ATCGGGTGAC GGTCCAGCTG CTGCCGACCT CGGCGGGCCC GCACCCCGGC
GTCGCCGGGC CCTTCTCCGT CCTGGAGTTC GACGAGGACG AGGCCGCCCT GGCCTACGTC
GAGGCCACCC AGGGCGGCTC CATCGTGGAG GCGGAGGAGT CGGTCGCGGT CTGCAAGAGG
GTGTGGTCCG AACTCACGCG GATCGCTGCT TCTCCGCAGG CCAGCCTGGG TATTCTCCGT
CGGATGGCGC TGCTGACCTG A
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| Protein sequence | MLGGVFRWWY TSATLRHGII VMTSPTVRRR RLSAELRRHR VRAGMTLSDV ADELEWSPAK
LGHIETGIRK WPSVMEISAL LRLYGVTGGQ REAILTLVRE SRLRPWWTEY EDVLSSAYVG
NEAGAVSVQS YAGILVPDLL QVPDYTAAVA RALGHGERTV ERMVAAYLKR QEVLDHGGPD
LGSSGSLVRY HAIVEEDALQ RVSGNRELLR AQTSRIVELA TGSDRVTVQL LPTSAGPHPG
VAGPFSVLEF DEDEAALAYV EATQGGSIVE AEESVAVCKR VWSELTRIAA SPQASLGILR
RMALLT
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