| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5210 |
|---|
| Symbol | |
|---|
| ID | 9249103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014211 |
|---|
| Strand | - |
|---|
| Start bp | 361202 |
|---|
| End bp | 362506 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | copper resistance protein CopC |
|---|
| Protein accession | YP_003683096 |
|---|
| Protein GI | 297564123 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.192134 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.695526 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGACCCG CTCACGGCAC ACTCCGCCTC CTGCGCACGG CCCTTCTGGC CGCTGCGTGC
ACGGGGCTTG CCTGGGGCGG GCACAACCTG TGGGCCGCGG CGCCCGCCTC CCCCGGAGGG
CTGGCCGCGG CGACCGCGGT CCTGTTCCCC CTGCTGTGGT ACTTCACCCG CACGATGCGC
GGGTTCGGCG ACATCTTCGC CGTCATGGCC TGCGTGCAGA TCCTCCTGCA CCTGGTGTTC
CAGGGTTCGG GCGAACCCGT CCCCGGGGTC CTCGACACCG GCGCCGACCA CACCGGGCAC
GGCCTGCTCA CCCACACCCT CGGCCTCGCG CCCGGCATGC TGTTCGCGCA CCTGTGGGCG
GCCCTGCTGG CGTCGGCGCT GCTCGCCCAC GGCGAGGCGG CCCTGTGGTT CCTGACCGCC
CTGCTCACCC GGGCCCTGCC GCCGCTGCGC GTGCCCGGCA TCGCGTTCGG CGCCCGCGTA
CCGGTCGCGT GCGCCGCCTC CCGTACCGCT CCCCCGCCCG TCGCGCTCTC GGCGCACGGC
CCGCGCGGAC CTCCCCTCCT CCCGGGCGTC CTTCCACGAC GCCCCCGCGC GCACGCCGGA
ACGTACCGAG AACTGAGGGA AGACATGACC ACCACCCGCA CCCCCGACAC CGCGGCCCCC
GCACGCGCGC TTGCGCGCGC GGCCGCCGCC GTACTCGCCC CCCTCGCCGC GGCCGCCCTG
GCCCTGGCCC CCTCGCCCGC GCTGGCGCAC GACGTCCTGA CCGGGTCCAA CCCGGAGGAC
GGGGCCACCC TGGACACCGT GCCCGAGGAG GTCGTGCTGA GCTTCAACAA CTCGCCGATG
GAGGGCGGCA GCGGCAGCGC CGTCGTCGTC ACGGGGCCGG ACGAGGAGAC CACCTACGAG
GAGGGGGACC TGACCTTCGA CGGCACGGAC GTGTCGGTGG GTCTGGCCCC GCTGGACCAG
GCCGGTGAGT ACACCATCGG GTTCCGCGTG GTCTCCTCCG ACGGCCACCC GATCCAGGAC
ACCCTGACGT TCTCGGTGAC CGAGGAGGCC GTCGCCGCGG CGGCGCCGGA GCCCGAGGAG
AGCGAGACCG CGCAGGAGCC CGCCGGGGAG ACGGCGCAGG AGCAGGCGCA GGGGCCCTCC
GGCGAGGCGA ACGCGGACGA GGCCGCGGCC GAGGAGGAGT CGGGCGGCGT GTCACCGGTG
GCGCTGGCGG TCGTGGCCGT CGTCGCGGTC GCCGGCATCG CCGCGGTCGT GCTCGTGGCC
GTGCGCATGC GCAGGCGCCC GGGCGGGGAC GCCGGGCAGA AGTAG
|
|---|
| Protein sequence | MRPAHGTLRL LRTALLAAAC TGLAWGGHNL WAAAPASPGG LAAATAVLFP LLWYFTRTMR
GFGDIFAVMA CVQILLHLVF QGSGEPVPGV LDTGADHTGH GLLTHTLGLA PGMLFAHLWA
ALLASALLAH GEAALWFLTA LLTRALPPLR VPGIAFGARV PVACAASRTA PPPVALSAHG
PRGPPLLPGV LPRRPRAHAG TYRELREDMT TTRTPDTAAP ARALARAAAA VLAPLAAAAL
ALAPSPALAH DVLTGSNPED GATLDTVPEE VVLSFNNSPM EGGSGSAVVV TGPDEETTYE
EGDLTFDGTD VSVGLAPLDQ AGEYTIGFRV VSSDGHPIQD TLTFSVTEEA VAAAAPEPEE
SETAQEPAGE TAQEQAQGPS GEANADEAAA EEESGGVSPV ALAVVAVVAV AGIAAVVLVA
VRMRRRPGGD AGQK
|
|---|
| |