Gene Ndas_5165 details

Gene Information

• Locus tag: Ndas_5165
• ID: 9249058
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111
• Kingdom: Bacteria
• Replicon accession: NC_014211
• Strand: +
• Start bp: 305370
• End bp: 308876
• Gene Length: 3507 bp
• Protein Length: 1168 aa
• Translation table: 11
• GC content: 70%
• Product: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
• Protein accession: YP_003683051
• Protein GI: 297564078

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.390829
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGGAGTCAT TTGTGGTCGC ACTCAGTGTC GTCGTACCCA TCTACAACGT CGAGAGGTAT 
CTCGACGAGT GCCTGCGCTC CCTTCAGGTG CAGACGTGGG ACGATCTCGA GGTCGTGATG 
GTGGACGACG GGTCCCCGGA CGGCAGCGCG GCCATCGCGG CCCGATACGC CGAGCAGGAC 
CCCCGCTTCC GGCTGATCCA GCAGGAGAAC GGCGGCCTGG GCGCCGCCCG CAACACCGGC 
ATCGAGCACG CGCGCGGCGA CTTCCTGACC TTCGTGGACA GCGACGACGT GATCCCGTCC 
TACGCGTTCG GCTACCACCT GGAGAGCCTG CGCCGGAGCG GCTCGGACTT CTCCAGCGGC 
AACGTCCACC GCCTCAACGA GCTGGGCACG CGCCAGTCGC CGATGCACCG CAGGATCTTC 
CGCACCGCGA AGACCGGCAC GCACATCACG CGCGAGGACA CGCTCCTGGT GGACCGGCTG 
GCCACCAACA AGGTCTGGCG CCGCTCCTTC TGGGACAGGC ACGGGATGAC CTTCCCCGTC 
GGTGTCCTGC ACGAGGACAT CCCCGTGGCC ATCCCCCTGC ACTTCCTCGC CGAGTCGGTG 
GACGTGCTCT CCGCGCCCGT CTACCTCTGG CGCGAGCGCC CGAGCGACGA CAAGTCCATC 
ACCCAGGACC GGCTGCGACC CCAGGCCCTG GAGGACCGCG TCAGCGCGGT CACCAAGGTC 
AGCGACTTCC TCAGGGAGAA CCAGCCGCCC CTCCAGAAGC GCCGGTGGGA CGCGGTGGCG 
CTCGGCAGCG ACCTGCGCCT CTTCCTCCAG GTGCTCGACC GGGCCGACGC GGACTTCACC 
CGGCGGCTCG TCGAGCTCGG CAACGCCTAC CTGGACCAGG TGGACGACAA GGTGCTGCGC 
GACCTCCCCG CCATCGAGCG CCTCAAGTGG CACCTCATCC GGCAGCGCAA GGTCGAGCAG 
CTGCGCGAGG TCATCGTCTT CAACAAGAGC GCCGAGCACA AGAAGGCCAA GATCGTCCGG 
CACGGGATCC GCTACTACGC GGACTACCCG TTCAAGGACG ACCCCGCCCA GGGCGTGCCG 
CGCTCGGTCT ACCGCGTGCG CTCGGAGCTC AAGCTCCGCC AGAAGGCCGA GGAGCTCACC 
TGGGTCGACG GCAAGCTCGT CGTCGGGGGC CGGGTCTGCC TGAAGTACCT GCGGCCCAAC 
AAGCGCCTCC AGCAGCAGGT CCGCGCCTGG GCGGTCAACG CCGAGGACGG CAGGCGCGTG 
CGGCTGAGCA CGACCACGCA CCAGGCCAAC GAGTTCCGGC TCGCCCCGAC GGTGGCCACC 
TCCCGCAAGG ACTGGGGCGG CTACCGGATC GTCATCGACC CCGCCGAGCT GGGGGACGAG 
GGCGACTGGT ACGTGGAGCT GGGCGTGGTC AACCGCGGCT TCCGCCGTGT GGACCGCCTC 
AAGAAGCCCG CCGCGGCCGA CGTCCGGATG CTCGGCCCCG AGCAGGTCCG GCCGGGCGTG 
TGGGCCCGCC CGCACTGGGT GGACGACTTC GAGCTGCGCC TGACCGTCGA GCGACCGGCG 
GTCGTCCTGG ACGGCTCCGC GGTCGAGGGC TCCTCCCTGG TCCTGAGCGG CCGGGCGACG 
GGAACCCCGA CCGAGGGCCT GAGCGCCTAC GTCCAGCGCT TCCCCGGCGA CGTCGAGGTC 
CCGGCGAAGG TGGAGACCGA CGGCGCGTCC GTGCGCGTGC TCGCCGACCT GGCCGCCCTC 
ACCGACGGCT ACCAGGACAG GGACGCCATC GCGGGCAGCG ACCCCTACGA GGACTGGTCG 
GTCCACCTCC GGGACGGCTC CGGCCGCTCC CGGTGGATCC CCTTCGCCGA GGACGGCCCC 
GAGGGCCGCT ACGCGCACTC CGGCCTGAGC GTGCGGGTGC TCCCCGACTT CGCCGGGCGT 
ACCAGGGTCC GGGTGGAGCG GCCCCAGCCC CTGCTCACCG CCGTCTCCTG GGACGACGAC 
GTCCTCGACC TGCGGGGCGA CTTCCCCGAG ACCCCCACGG GAGAGCTCTC CCTGGTGGTC 
AAGGCCGTCG GCCGGATGGA GGAGCACCTG TTCCCGGTGG AGGCCGCGGA CGGCCGGTTC 
TCGGCCTCCG TCCCGCCCAC CGCGATCCCC AACTTCGGCA CGAAGGTGCC CCTCACGCCC 
GGCAACTACC GCTTCCTGCT GCGCACCGCC ACCGGCGACA ACCAGTGGGA CGACCGCCGG 
ATCGGCTTCT CGCGGGAGCT GCGCACCGCC AAGTTCCCCG CCCCCGAGAA GGAGGGCGGC 
TTCGACCTGG AGCTCAAGCC GGACGGCCGC GGGTGGCCCG TGCTGCGCCT GGGCTCGGTG 
CTGCGTCCGG AGGAGCAGGG GTCCTACGCG CAGCAGGTCC TGCGCGAGGA GGTCTACCCC 
AAGCTGCGCC GCAAGCCGGT GCTGCCCGGC ATCGTCTTCG ACAGCTACAC CGGCAAGCAG 
TTCTCCGACA GCCCGCGGGA CATGTACGAG GAACTGCGGC GCCGCGGCGT GGAGACGCCG 
ATGTCGTGGA TGGTGCGCAA CCGCCAGATC ACCCTGCCCC CGGGGCTGAC CGAGGTCCGG 
CACACGAGCC GCGAGTACTT CGAGGCGCTG GCGCGCTCGG AGTTCATCGT CTCCAACGCC 
CACCTGCCCA TGTGGTTCGA GAAGCAGCCC GGGCAGAAGG TCGTGCAGAC CTGGCACGGG 
TCGATGCTCA AGCGCATCGG CTTCGACATC GAGCACGTCC AGTTCGCGGG CCGCAACTAC 
CACGACCGGC TCCGGCACGA GACCAACCAG TGGGACTACC TGGTCTCCCC GAGCCCCTGG 
GCGACCCCGA TCCTGCGCCG CGCCTTCGGC TTCGAGAACG AGATCCTGGA GACCGGCTAC 
CCGCGCAACG ACATCTTCCA CCGCCCCGAG CGCGAGGCGG TGACGGAGGC GGTCCGCGAG 
CGCCTGGGCC TGCCGGAGGG CAAGAAGGTC ATCCTCTACG CGCCCACCTG GCGCGACGAC 
AAGTTCTACT CCGTCGGCAA GTACAAGCTG GACCTGCACC TGGACCTGCG GCGGCTGTAC 
GACGCCCTCG GCGACGACCA CGTGCTGCTG TTCCGCAGGC ACCCCAACAT CGTCGACCGG 
GTGCCGAACG TGGGCAAGGA CTTCGTCTTC GACGTCTCGG CCTACCCCGA GATCCAGGAG 
CTGTTCCTGG TCACGGACAT CCTCATCACC GACTACTCGT CGCTGATGTT CGACTTCGCC 
AACACCGGCC GCCCGATGCT GTTCTTCACC TACGACCTGG AGGAGTACCG CGACAGCCTG 
CGCGGGTTCT ACTTCGACTT CGCCGAGACC GCCCCGGGCC CGCTGCTGCG CACCTCCGAC 
GAGGTCATCG ACTCGATCCG CGACATCGAC GGGGTCCAGG AGGCCCACAG GGAGCGGTAC 
GAGGCCTTCG TGAACCAGTT CTGCCCCCTG GACGACGGCA AGGCCGCGGC CCGGGTGGTC 
GAGCAGGTCT TCGGCAAGCT CCTCTGA 

 

Protein sequence

MESFVVALSV VVPIYNVERY LDECLRSLQV QTWDDLEVVM VDDGSPDGSA AIAARYAEQD 
PRFRLIQQEN GGLGAARNTG IEHARGDFLT FVDSDDVIPS YAFGYHLESL RRSGSDFSSG 
NVHRLNELGT RQSPMHRRIF RTAKTGTHIT REDTLLVDRL ATNKVWRRSF WDRHGMTFPV 
GVLHEDIPVA IPLHFLAESV DVLSAPVYLW RERPSDDKSI TQDRLRPQAL EDRVSAVTKV 
SDFLRENQPP LQKRRWDAVA LGSDLRLFLQ VLDRADADFT RRLVELGNAY LDQVDDKVLR 
DLPAIERLKW HLIRQRKVEQ LREVIVFNKS AEHKKAKIVR HGIRYYADYP FKDDPAQGVP 
RSVYRVRSEL KLRQKAEELT WVDGKLVVGG RVCLKYLRPN KRLQQQVRAW AVNAEDGRRV 
RLSTTTHQAN EFRLAPTVAT SRKDWGGYRI VIDPAELGDE GDWYVELGVV NRGFRRVDRL 
KKPAAADVRM LGPEQVRPGV WARPHWVDDF ELRLTVERPA VVLDGSAVEG SSLVLSGRAT 
GTPTEGLSAY VQRFPGDVEV PAKVETDGAS VRVLADLAAL TDGYQDRDAI AGSDPYEDWS 
VHLRDGSGRS RWIPFAEDGP EGRYAHSGLS VRVLPDFAGR TRVRVERPQP LLTAVSWDDD 
VLDLRGDFPE TPTGELSLVV KAVGRMEEHL FPVEAADGRF SASVPPTAIP NFGTKVPLTP 
GNYRFLLRTA TGDNQWDDRR IGFSRELRTA KFPAPEKEGG FDLELKPDGR GWPVLRLGSV 
LRPEEQGSYA QQVLREEVYP KLRRKPVLPG IVFDSYTGKQ FSDSPRDMYE ELRRRGVETP 
MSWMVRNRQI TLPPGLTEVR HTSREYFEAL ARSEFIVSNA HLPMWFEKQP GQKVVQTWHG 
SMLKRIGFDI EHVQFAGRNY HDRLRHETNQ WDYLVSPSPW ATPILRRAFG FENEILETGY 
PRNDIFHRPE REAVTEAVRE RLGLPEGKKV ILYAPTWRDD KFYSVGKYKL DLHLDLRRLY 
DALGDDHVLL FRRHPNIVDR VPNVGKDFVF DVSAYPEIQE LFLVTDILIT DYSSLMFDFA 
NTGRPMLFFT YDLEEYRDSL RGFYFDFAET APGPLLRTSD EVIDSIRDID GVQEAHRERY 
EAFVNQFCPL DDGKAAARVV EQVFGKLL