Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_5144 |
Symbol | |
ID | 9249037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | + |
Start bp | 287399 |
End bp | 288712 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | preprotein translocase, SecY subunit |
Protein accession | YP_003683030 |
Protein GI | 297564057 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.552257 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTAGGTG CGTTCGTTCG TGCATTCCGC ACGCCCGACC TGCGCAACAA GCTGCTGTTC ACACTGTTCA TCCTGACGAT CTTCCGTCTG GGCTCGGTGA TCCCGGCGCC GGGTATCAAC TCCGCGGCGA TCAGGGACCA GATGGAGGCG ATCACCTCCT CGGACCAGTC CGGTGTGTAC GCGCTCGTCA ACCTGTTCAG CGGCGGTGCC CTGCTGCAAC TGGCGGTGTT CGCGCTCGGG GTCATGCCGT ACATCACCGC GAGCATCATC ATCAACCTGC TCACGGTGGT GATCCCCCGT CTGGAGGCCC TCAAGAAGGA GGGCCAGTCC GGACAGAGCA AGATCACCCA GTACACCCGC TACCTGACGC TCATGCTCGG TGTCCTCCAG GCCACCAGCA TCGTCGCCAT GGCCCGGACG GGCGCCCTGT TCCAGGGGGC CATCCCGGTC AGCTCCTACA TGCCCAACCA GGACATCCTC ACCCTGGTGA CCATCGTCTT CACGATGACG GCCGGTACCG CCATCATCAT GTGGTTCGGC GAGCTCATCA CCGAGCGCGG CGTGGGCAAC GGCATGTCGC TGCTGATCTT CACCCAGGTC ATCGCGATGT TCCCCTCCTC CATGGTCGCG CTGTTCCAGG AGCGCTCGAT CTGGGTCTTC TCCCTCATCT GCATCGCCGG CCTGGTGCTC ATCACCGCGG TGGTCTTCAT GGAGCAGGCC CAGCGCCGCA TCCCGGTGCA GTACGCCAAG CGCATGGTCG GCCGCCGCAT GTACGGCGGC AGCTCGACCT ACATCCCGCT GAAGGTGAAC CAGGCGGGCA TCATCCCCGT GATCTTCGCC TCCTCGCTGC TGTACCTGCC GCAGCTGCTC GTGGGACTCA TGGGACAGGA CTCCACCCAT CCCGTGGTGA CCTTCGTGCA GGACTACTTC CTCACCGGCA CCCACCCCGT GTACATGGCG ACGTTCTTCG TCATGATCAT CGGCTTCGCG TTCTTCTACG TGGCGATTAC CTTCAACCCC GCTGAGGTCG CCGACAACAT GAAGAAGTAC GGTGGGTTCA TCCCGGGTAT CCGACCAGGG CGTCCGACCG CCGAGTACCT CGACTACGTG CTGACGAGGC TGACGACCCC CGGATCCCTG TACCTGGGTG TGATCGCTCT CCTGCCGATG GTCGCCCTCG GCGCCACCGG CGCCAGTGCG AACTTCCCCT TCGGAGGGAC GAGCATCCTG ATCATGGTCG GCGTCGGGCT GGACACGGTG AAGCAGATCG AGAGTCACCT CCAGCAGAGG AACTACGAAG GTTTTCTGCG ATAA
|
Protein sequence | MLGAFVRAFR TPDLRNKLLF TLFILTIFRL GSVIPAPGIN SAAIRDQMEA ITSSDQSGVY ALVNLFSGGA LLQLAVFALG VMPYITASII INLLTVVIPR LEALKKEGQS GQSKITQYTR YLTLMLGVLQ ATSIVAMART GALFQGAIPV SSYMPNQDIL TLVTIVFTMT AGTAIIMWFG ELITERGVGN GMSLLIFTQV IAMFPSSMVA LFQERSIWVF SLICIAGLVL ITAVVFMEQA QRRIPVQYAK RMVGRRMYGG SSTYIPLKVN QAGIIPVIFA SSLLYLPQLL VGLMGQDSTH PVVTFVQDYF LTGTHPVYMA TFFVMIIGFA FFYVAITFNP AEVADNMKKY GGFIPGIRPG RPTAEYLDYV LTRLTTPGSL YLGVIALLPM VALGATGASA NFPFGGTSIL IMVGVGLDTV KQIESHLQQR NYEGFLR
|
| |