| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5003 |
|---|
| Symbol | |
|---|
| ID | 9248892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014211 |
|---|
| Strand | + |
|---|
| Start bp | 144529 |
|---|
| End bp | 145323 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | pyrroline-5-carboxylate reductase |
|---|
| Protein accession | YP_003682890 |
|---|
| Protein GI | 297563917 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.102233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCCA TCATCGGTGC CGGGAAGATG GGCGAGGCTC TGCTCGCCGG AATGCTGGCC
ACGGGCCACG CGCCGGAGGA CGTCCTCGTC ACCGAGCCGC GCGAGGAGCA CGCCGGGGAG
CTGCGCGCCC GCTACGGGAT CGAGGTGGTC CCGGCCGCGG ACGCCGCCAA GCGCGCCGAC
ACCCTCCTGC TCGCGCTCAA GCCCCAGGAC ATGGTGGCGC TGCTGGACGA CCTGGCGCCG
CGCCTGTCCT CCTCCTGCCT CGTGATCTCC GTCGCGGCCG GGATCACCAC CGCCGTGCTG
GAGGAGCACC TGCCCTCCGG GACCCCCGTC GTCCGGGCGA TGCCCAACAC GCCCGCCCTG
ATGGGGCAGG GGATGACCGC GATCGCGGGC GGCGCCCACA CCGGTGAGGC CCACCTGGAC
CGCGCCGAGG CGCTGCTGGG CACGGTCGGC GATGTCATCC GCGTGGGCGA GCAGCACATG
GACACCGTCA CCGCCATCTC CGGCAGCGGC CCCGCCTACT TCTACTTCAT CGCCGAGACG
ATGATCGAGG CCGGTGTGGC GATGGGGATG CCGCGCGCCA CCGCGCAGAA GCTGGTCGGC
CAGACCATCA CCGGCGCCGC CGCGATGCTC AACGGCTCGG GCGAGCACCC GGTCGTGCTG
CGCGAGGCCG TCACCTCGCC GGGCGGCACC ACCGCCGCCG CGCTGCGCGA GCTGGAGCGG
CACGGCGTGC GCACGGCCTT CACCGACGCC ATCGAGGCGG CCAGGGACCG CAGCAACGCG
CTCTCCGGAA GCTGA
|
|---|
| Protein sequence | MIAIIGAGKM GEALLAGMLA TGHAPEDVLV TEPREEHAGE LRARYGIEVV PAADAAKRAD
TLLLALKPQD MVALLDDLAP RLSSSCLVIS VAAGITTAVL EEHLPSGTPV VRAMPNTPAL
MGQGMTAIAG GAHTGEAHLD RAEALLGTVG DVIRVGEQHM DTVTAISGSG PAYFYFIAET
MIEAGVAMGM PRATAQKLVG QTITGAAAML NGSGEHPVVL REAVTSPGGT TAAALRELER
HGVRTAFTDA IEAARDRSNA LSGS
|
|---|
| |