| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4871 |
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| Symbol | |
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| ID | 9248758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014211 |
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| Strand | + |
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| Start bp | 1876 |
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| End bp | 3363 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | putative short chain dehydrogenase |
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| Protein accession | YP_003682760 |
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| Protein GI | 297563787 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00534901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.736841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACA CGGGTACCCG GACGCTGCCG GAGGAGTCGG AGCACCCGGC GGAGCGGATC
GACCCCGACC GGTTGGCCGC GTGCCTGGAC GTGATCGCCC GCGCCGGTGA GCTGCCCAGC
GACCACCCGG ACTCGGTCGC CCTCCAGCGC GCGACCGCCC GCCTGTTCAA GAACGTCAAG
GAGCGGCGCC GCAAGGAGCG CCAGGCCGCC CGCCAGGCCC ACGACAGGGC CGTGTTCGCG
GCCACCGCCA CCGCGGCGCC GGACCGGATC GACGACGAGA CCAACGGCCG CGCCCTCACC
AGCGGCAGCG GCGGCGCCCT CGCGGGCGTG CTGAGCAGGC CCCGGCCCTG CTACATCTGC
AAGGAGAGGT ACCGGGAGGT CGACTCCTTC TACCACCAGC TGTGCCCCGC GTGCGCCGCG
TTCAACAGGG AGCGCCGCAA CGCCCGCACC GACCTGACCG GGCGCCGGGC CCTGCTCACC
GGCGGCCGGG CCAAGATCGG CATGTACATC GCACTCCGGC TGCTCAGGGA CGGCGCGCAC
ACGACCGTCA CCACACGTTT TCCCAACGAC GCGGTGCGCC GGTTCGCCGC GATGCCCGAC
AGCGGCGAGT GGCTGCACCG GCTGCGGGTG GTGGGCGTCG ACCTGCGCGA CCCCGCCCAG
GTGCTGCGGC TGGCCGACGC GGTGGCCGAA CAGGGGCCGC TGGACATCCT CATCAACAAC
GCGGCCCAGA CGGTGCGCCG TTCGCCCGGC TCCTACGGGC CGCTGGTCGA GGCCGAGGCC
GAACCGCTCA CGGGCGAGGG CCTCCCCGAG CCGCTGGTGC TGGGCGGCGT GCGCCCGCGC
GCCCTGGAGG ACCGCGCCGA CCCTGGGCGG GACGCCCCGG CGACCCACGC GCTCACTCCG
GCCATGCTCA CCTCCCTGGC GCTGACCACG GGCTCCGCGT CGATGGAGAG GGTGCGCACC
GGGACGGCGA TCGACGCCGG AGGGCTGGTG CCCGACCTGG CCCCGGTGAA CAGCTGGACG
CGGCGGATCG GCGAGGTCGA CCCCGTCGAG ATGCTGGAGG TGCAGCTGTG CAACGTGAGC
GCGCCGTTCC TGCTGGTGGA CCGGTTGCGC CCGGCCCTGG CCGCGTCCCC GGCGCGCCGC
ACCTACATCG TCAACGTGTC GGCGATGGAG GGGGTGTTCG GCCGCGGCTA CAAGGGGCCG
GGGCACCCCC ACACCAACAT GGCCAAGGCC GCGCTCAACA TGCTCACCCG CACCAGCGCC
CAGGAGATGC TGGAGTCCGA CGGAATCCTG ATGACCAGCG TGGACACCGG GTGGATCACG
GACGAGCGCC CGCACCCGGA GAAGGAGCGG CTGGTCGAGG CCGGGTTCCA CGCGCCCCTG
GACCTGGAGG ACGGGGCCGC GCGCGTGTAC GACCCCATCG TGCGGGGCGA GCTGGGAGAG
GACCTGCACG GGTGCTTCCT GAAGGACTAC GCCCCCGCCA ACTGGTAG
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| Protein sequence | MTDTGTRTLP EESEHPAERI DPDRLAACLD VIARAGELPS DHPDSVALQR ATARLFKNVK
ERRRKERQAA RQAHDRAVFA ATATAAPDRI DDETNGRALT SGSGGALAGV LSRPRPCYIC
KERYREVDSF YHQLCPACAA FNRERRNART DLTGRRALLT GGRAKIGMYI ALRLLRDGAH
TTVTTRFPND AVRRFAAMPD SGEWLHRLRV VGVDLRDPAQ VLRLADAVAE QGPLDILINN
AAQTVRRSPG SYGPLVEAEA EPLTGEGLPE PLVLGGVRPR ALEDRADPGR DAPATHALTP
AMLTSLALTT GSASMERVRT GTAIDAGGLV PDLAPVNSWT RRIGEVDPVE MLEVQLCNVS
APFLLVDRLR PALAASPARR TYIVNVSAME GVFGRGYKGP GHPHTNMAKA ALNMLTRTSA
QEMLESDGIL MTSVDTGWIT DERPHPEKER LVEAGFHAPL DLEDGAARVY DPIVRGELGE
DLHGCFLKDY APANW
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