Gene Ndas_4838 details

Gene Information

• Locus tag: Ndas_4838
• ID: 9248724
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111
• Kingdom: Bacteria
• Replicon accession: NC_014210
• Strand: -
• Start bp: 5731406
• End bp: 5734003
• Gene Length: 2598 bp
• Protein Length: 865 aa
• Translation table: 11
• GC content: 70%
• Product: replicative DNA helicase
• Protein accession: YP_003682727
• Protein GI: 297563753

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGAGTGTCG CTGAGCAGCC ACCTGAAGAA GGCGGATACG AGCGCACCCC GCCCCACGAC 
ATCCAGGCCG AGCAGAGCGT GCTCGGCGGC ATGCTGCTGT CCAAGGACGC CATCACGCAG 
GTCGTGGAGA TCATCCGCTC CGCCGACTTC TACCGCCCCG CGCACCAGAT CATCTACGAG 
AGCATCGTCG ACCTCTTCTC CCGCGGCGAG CCCGTGGACG CCATCTCGGT CAACGCCGAG 
CTGACCAAGC GCGGCGAGGC CACCCGGGTC GGCGGCGCCC TCTACCTGCA CACCCTCACC 
GAGGCCATCC CGACCGCGGC CAACGCGGGC TACTACGCCA AGATCGTCTC CGACCGCGCG 
GTCCTGCGCC GCCTGGTCGA GGTGGGCACC CGCATCGCCC AGATCGGCTA CGCCGGGGAC 
GGCGAGGTGG ACGACCTGGT CGACCACGCC CAGGCCGAGA TCTACAAGGT CGCGGAGAAG 
CGCACCGGCG AGGACTACGT CGCGCTCGCC GACATCATGC CGGGCGCCCT GGACGAGATC 
GAGGCGATCG GCGCCAACGA CGGGACCATG ACCGGCGTGC CCACCGGCTT CGCCGACTTC 
GACGCCCTCA CCAACGGCCT CCACCCCGGC CAGATGGTCA TCATCGCCGC CCGCCCGGCC 
GTTGGCAAGG CGCTGGCCCT GGACACGCCC CTGCCGACAC CCGGCGGATG GACCACCATG 
GGGGAGGTGG AGGTCGGCAC CGAGCTGATC GCCGCCGACG GGACACCCAC CCGGGTGGTG 
GCCGCCACCG AGGTCATGAC CGGGCGGCCC TGCTTCGAGG TCGTGTTCGA CGACGGCACC 
ACCGTCGTCG CCGACGGCGA CCACCAGTGG CTGACCCACA CGCGGGCCTC GCGGCGCGCG 
GCCCGGGAGG CCGAGGCCCG GGGCACGGTT CCCCGTGTGC TGCCCGAGGT GAGGACCACC 
AGGGAGATCG CCCGGACCCT GCGTACGGAG ACCGCCGACC GCAGGCTGAA CCACTCGGTG 
GTCAACGCGG AGGCCATCGA GCTGCCCGAA CGCGACCTCC CCCTGCCGCC CTACTTCCTC 
GGCGCCTGGC TCGGTGACGG AGCCTCCGCC GCCGCCCGGG TCACCAGCAC GGACCCCGAG 
GTCCTGCTCA ACATCGAGGC CGAGGGACTC GTGACCAAGC CGGTCGGCTC CACCGGCATG 
ACCTATGGTG TCTTCCTGCC GGAGGAGGAC ACCACGCCCA CGGCCCGTGA GTGCGTGGTG 
TGCGGAACGG AGTTCGTGCC CTCCCTGCCT CACGTGCGCA GCTGTGGGCA GTCGTGCGGG 
GGCAAGGCGC GCTTCGTCTC CGATCCTGTG CCGCACACCT CCTGCGTCGA CTGCGGGCGC 
CCCTGCTTCG GTCAGCTCCG GTGCCGTGAG TGCGTCACCA GCCACGGCAG TGTCCAGGCG 
CGGTTGCGCA CCCTCGGGGT TCTGGGGAAC AAGCACATCC CCCAGGAGTA CCTGCGCGCC 
TCGGCCGACC AGCGGCGCGC CCTCCTCGCC GGTCTGCTGG ACACGGACGG CACGGTGAAC 
GCCACCGGCT CCGTGCAGTT CGCGGTCACC AGCCAGCGCC TGGCGAACGG CTTCCGGGAA 
CTGGCGCACA GCCTGGGGTA CCGCACCGGG ATGTCGACCA GGCGGGTCGG CGGCCGGTCG 
GAGGAATCGT CGACCTGCTA CACGGTCACC TTCGGCTCCA GGAGCGAGGT CTTCCGACTC 
GCACGCAAGA GGCGTGCGCA CCGGGAGCGC GGCGCCGACC GAGGTTACGC ACGGATCGGC 
TCCCGGTTCG TCACCGAGGT GCGACCGGTG GAGAGCGTTC CGGTCCGCTG CGTCCAGGTG 
GACCACCCGG ACCACCTGTT CCTGGCCACC CGGTCGATGG TCCCCACCCA CAACTCGACG 
CTGGCCCTGG ATTTCGCGCG TGCGGCGTCC ATCAAGCACG ACATGACCGC GGTCTTCTTC 
AGCCTGGAGA TGGGGCGCAA CGAGATCGTC ATGCGCCTGC TGTCGGCGGA GGCCCGGGTG 
CCCCTGCACA CCATGCGCTC GGGTCTGATG ACCGACGAGG ACTGGACCCG CCTGGCCAGG 
CGCATGGGCG AGGTGGCCAA CGCGCCCCTG TTCATCGACG ACTCCCCGAA CATGTCGATG 
ATGGAGATCC GGGCCAAGTG CCGGCGGCTC AAGCAGCAGC ACGACCTCAA GCTGGTCATC 
GTCGACTACC TCCAGCTGAT GAGCTCGCCC GGCCGGGTGG AGAGCCGTCA GCAGGAGGTC 
TCGGAGATGT CCCGGTCGCT CAAGCTCCTG GCCAAGGAGC TGGAGGTCCC GGTGGTGGCG 
CTCTCCCAGC TGAACCGAGG CCCCGAGCAG CGCACCGACA AACGCCCGCA GGTGTCCGAC 
CTCCGTGAGA GTGGATCGAT CGAGCAGGAC GCGGACATGG TCATCCTGCT CTACCGCGAG 
GACGTGCACG ACAAGGAGTC GCCGCGCGCG GGCGAGGCGG ACATCATCGT GGCCAAGCAC 
CGCAACGGCC CCACGGCGGA CGTGACCGTG GCCTTCCAGG GCCACTACAG CCGGTTCGTC 
GACATGGCAC CCGGCTAG 

 

Protein sequence

MSVAEQPPEE GGYERTPPHD IQAEQSVLGG MLLSKDAITQ VVEIIRSADF YRPAHQIIYE 
SIVDLFSRGE PVDAISVNAE LTKRGEATRV GGALYLHTLT EAIPTAANAG YYAKIVSDRA 
VLRRLVEVGT RIAQIGYAGD GEVDDLVDHA QAEIYKVAEK RTGEDYVALA DIMPGALDEI 
EAIGANDGTM TGVPTGFADF DALTNGLHPG QMVIIAARPA VGKALALDTP LPTPGGWTTM 
GEVEVGTELI AADGTPTRVV AATEVMTGRP CFEVVFDDGT TVVADGDHQW LTHTRASRRA 
AREAEARGTV PRVLPEVRTT REIARTLRTE TADRRLNHSV VNAEAIELPE RDLPLPPYFL 
GAWLGDGASA AARVTSTDPE VLLNIEAEGL VTKPVGSTGM TYGVFLPEED TTPTARECVV 
CGTEFVPSLP HVRSCGQSCG GKARFVSDPV PHTSCVDCGR PCFGQLRCRE CVTSHGSVQA 
RLRTLGVLGN KHIPQEYLRA SADQRRALLA GLLDTDGTVN ATGSVQFAVT SQRLANGFRE 
LAHSLGYRTG MSTRRVGGRS EESSTCYTVT FGSRSEVFRL ARKRRAHRER GADRGYARIG 
SRFVTEVRPV ESVPVRCVQV DHPDHLFLAT RSMVPTHNST LALDFARAAS IKHDMTAVFF 
SLEMGRNEIV MRLLSAEARV PLHTMRSGLM TDEDWTRLAR RMGEVANAPL FIDDSPNMSM 
MEIRAKCRRL KQQHDLKLVI VDYLQLMSSP GRVESRQQEV SEMSRSLKLL AKELEVPVVA 
LSQLNRGPEQ RTDKRPQVSD LRESGSIEQD ADMVILLYRE DVHDKESPRA GEADIIVAKH 
RNGPTADVTV AFQGHYSRFV DMAPG