Gene Ndas_4827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4827 
Symbol 
ID9248712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5720549 
End bp5723023 
Gene Length2475 bp 
Protein Length824 aa 
Translation table11 
GC content73% 
IMG OID 
ProductBeta-mannosidase 
Protein accessionYP_003682716 
Protein GI297563742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTC ACACCCTGCA CGACGGCTGG CGGCTGTCCG CGACGAGCGG GCCCGTCCCG 
GAGAACGTCG CGGGCCGCAC CGTCCCCGCC CAGGTCCCGG GGAGCACCCA CCTGGACCTG
CTGGCCGCCG GGCTGATCCC CGAGCCCTAC CTGGACAGCA ACGAGACCGA GCTGGCCTGG
ATGCACCGCG CGGGCTGGCG CTACTCCCTC ACGTTCGAGG CCGACGCGGT CGAGGACGGC
GAACGCGTCG ACCTGGCCTT CGACGGCCTG GACACGGTGG CCACCGTGGA GCTCAACGGC
ACCGTGCTCG GCACCACCGC CAACATGCAC CGCGGGTACC GCTTCGACGT GCGCGACACG
CTGCGCGCCG GGGCCAACGA GCTCGTGGTC GTCTTCCGGT CCGCGCTGGA GTACGCCGAG
GAGGTCCGCG GGGAACTCGG CGAGCGGCCG CACACCAACA CGCACCCGTA CAACATGGTC
CGCAAGATGG CCTGCTCCTT CGGCTGGGAC TGGGGGCCCG ACCTCCAGAC CGCCGGCATC
TGGAAGCCCG TGCGCCTGGA GCGGTGGCGC ACCGCCCGCC TCTCCCAGGT ACGCCCGCTG
GTCACCGTCG GCGAGGACGG CACCGGCCGG GTGGAGGTGC ACGCCGACGT CGAGTGGTCC
GGGAGCGCTC CCGGTCCCGG TCTGGTCCTG TCCGCCGAGG TCGCCGGTGC GCGGGCCACC
GCCGACGTGG CGCCCGGCGC GGAGGGCGGC GTGGTCGTGG TCGAGGTGCC CGACGCCCGC
CTGTGGTGGC CGGTCGGCCA CGGCGACCAG CCCCTGTACG ACCTGTCCGT CACCCTGACC
GCGGACGGGC GGGCCGAGCC GCTGGGCTCG GAGGACCGCC GCGTGGGCTT TCGCACCATC
ACCGTGGACA CCACGCCCGA CGAGCACGGC ACCCCCTTCA CCGTCGTGGT CAACGGCAAG
CCGATCTTCG TCAAGGGCGC CAACTGGATC CCCGACGACC ACTTCCTCAC CAGGATCACG
CGCGAGCGTC TGGCCCGGCG CGTGGACCAG ACCGTCGGCG CGCACATGAA CATGCTGCGC
GTGTGGGGCG GCGGGATCTA CGAGAGCGAG GACTTCTACG ACGTCTGCGA CGAGCGCGGC
GTCCTCGTGT GGCAGGACTT CCTCCTGGCC TGCGCCGCCT ACCCCGAGGA GGAGCCGCTG
TGGGGTGAGT TCGAGGCCGA GGCCCGGGAG AACGTCGCGC GCCTGACCTC GCACGCCTCG
CTGGCCCTGT GGAACGGCGG CAACGAGAAC CTCTGGGGCT TCATGGACTG GGGCTGGCAG
GAGCGGCTCG GGGACCGGAC CTGGGGTTAC GGCTACTACA CCGACCTCTT CCCCCGCGTC
GTGGCCGAGC TCGATCCCAC CCGGTTCTAC GCCGACGGCA GCCCCTACAC CCCGGGGTAC
GCCCCGAAGG AGGTCCACCC CAACGACGAG GCGCACGGCA CGCGCCACGA GTGGACCGTG
TGGAACCAGA CCGACTACCG GGCCTACCAG GACCACGTGC CCCGGTTCTG CTCCGAGTTC
GGCTTCCAGG GTCCGCCCAC CTGGGCCACC CTCACCGACT GGGTGCACGA CGAGCCCCTC
ACGCCCACCT CGCCCGCCTT CCTGCTGCAC CAGAAGGCCG AGGACGGCAA CGGCAAGCTC
GCCCGGGGCC TGTCCGCCCA CCTGCCCACG CCGAGGAGCT TCGAGGACTG GCACTGGGCC
ACCCAGCTCA ACCAGGCCCG CGCGGTGGCG TTCGGCGTCG AGCACTTCCG GTCCTGGTGG
CCGCGCACCG CGGGCGCCCT GGTCTGGCAG ATCAACGACT GCTGGCCGGT CACCTCCTGG
GCGGCCGTGG ACGGCGAGGA GCGTCCCAAG CCGCTCTGGT ACGGGCTGCG CCGCGCCTAC
GCGCCGCGCC TGCTCACCGT CCAGCCCCGG GACGGGCGGC TGGTGCTGGT GGCCGTCAAC
GACACCGACG AGGCCTGGTC GGAGCCGGTC AGCGCGCAGC GCCAGACCTT CGGGGGCGAG
GTGCTGCACA CCGCTAGGAT CGAGCTGGCC GTACCGCCCC GTTCCGCGGC GGAGTTCGAC
CTGGCACGGG AGCTGCTCGC GGCCGGGGAC GCGAAGGAGG AGGTGCTCGT GGCCACGACC
CGCGACGCCC GCCTCGTGCG GCCCTTCCGC GAGGACGTCC ACCTGTCCTA CGACCCCGAC
GCGCTGACCG CCGTCGCCGC GCCCGTGGAG GGCGGCTACC GGGTGGAGGT GCGCGCCTCG
TCCTTCGCCA GGGACGTCTC CGTCCTGGCC GACCGGGTGG CCCCCGACGC CGAGGTGGAC
GACATGCTCG TGGACCTGCT GGCCGGGGAG ACGCACAGCT TCCTGGTGCG CACCGACGCG
GAGGTGGACC CGACGGCGCT GACCGCCGCC CCCGTCCTGC GCTCGGCCAA CTCCCTGCGC
GCGCGGCGGG CCTGA
 
Protein sequence
MIRHTLHDGW RLSATSGPVP ENVAGRTVPA QVPGSTHLDL LAAGLIPEPY LDSNETELAW 
MHRAGWRYSL TFEADAVEDG ERVDLAFDGL DTVATVELNG TVLGTTANMH RGYRFDVRDT
LRAGANELVV VFRSALEYAE EVRGELGERP HTNTHPYNMV RKMACSFGWD WGPDLQTAGI
WKPVRLERWR TARLSQVRPL VTVGEDGTGR VEVHADVEWS GSAPGPGLVL SAEVAGARAT
ADVAPGAEGG VVVVEVPDAR LWWPVGHGDQ PLYDLSVTLT ADGRAEPLGS EDRRVGFRTI
TVDTTPDEHG TPFTVVVNGK PIFVKGANWI PDDHFLTRIT RERLARRVDQ TVGAHMNMLR
VWGGGIYESE DFYDVCDERG VLVWQDFLLA CAAYPEEEPL WGEFEAEARE NVARLTSHAS
LALWNGGNEN LWGFMDWGWQ ERLGDRTWGY GYYTDLFPRV VAELDPTRFY ADGSPYTPGY
APKEVHPNDE AHGTRHEWTV WNQTDYRAYQ DHVPRFCSEF GFQGPPTWAT LTDWVHDEPL
TPTSPAFLLH QKAEDGNGKL ARGLSAHLPT PRSFEDWHWA TQLNQARAVA FGVEHFRSWW
PRTAGALVWQ INDCWPVTSW AAVDGEERPK PLWYGLRRAY APRLLTVQPR DGRLVLVAVN
DTDEAWSEPV SAQRQTFGGE VLHTARIELA VPPRSAAEFD LARELLAAGD AKEEVLVATT
RDARLVRPFR EDVHLSYDPD ALTAVAAPVE GGYRVEVRAS SFARDVSVLA DRVAPDAEVD
DMLVDLLAGE THSFLVRTDA EVDPTALTAA PVLRSANSLR ARRA