Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4793 |
Symbol | |
ID | 9248676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 5680857 |
End bp | 5681516 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003682683 |
Protein GI | 297563709 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.732153 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTCGCA TCCTCATCGT CGAGGACGAG GAGCGGATCG CCTCGTTCGT CCGCAAGGGC CTGGACGCCA GCGGGTTCAC CACCACCGTG GTGGGCACGG GGGCGGAGGC CGTGGACTAC GCGGTGACCG GCGGGTTCGA CCTGATGCTG CTGGACCTGG GCCTGCCGGA CACCGACGGG TTCGACGTGC TGCGGCGCGT GCGCTCGCTG GGCGTGGACA TCCCCGTGGT CATCCTGACC GCGCGCGACG GCGTGCGGGA CACGGTGACC GGCCTGGAGA TCGGGGCCGA CGACTACGTC ACCAAACCGT TCCGGTTCGA GGAACTGCTG GCCCGGGTGC GGCTGCGGAT GCGCAACGAG CGTCCGACCG AGCTGACGGT GCTGCGCGCG GGCGGCCTGG CCCTGGACCT GCGCACGCGG CGGGTGGCGG TGGAGGGGAC GTCCGTGGAC CTGACCGCGC GCGAGTTCTC CCTGCTGGAG CTGCTGATGC GGCACCCGGG CCAGGTGCTC ACCAGGCAGC AGATGCTGTC GCACGTGTGG GGCTACGACT ACGACCCCGG GTCGAACGTG GTGGACGTGT TCGTGCGGGC GCTGCGCCGC AAGGTGGGCG CGGAGCGGAT CGTGACCGTG CGCGGGATGG GCTACCGGTT GACCGGGTGA
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Protein sequence | MSRILIVEDE ERIASFVRKG LDASGFTTTV VGTGAEAVDY AVTGGFDLML LDLGLPDTDG FDVLRRVRSL GVDIPVVILT ARDGVRDTVT GLEIGADDYV TKPFRFEELL ARVRLRMRNE RPTELTVLRA GGLALDLRTR RVAVEGTSVD LTAREFSLLE LLMRHPGQVL TRQQMLSHVW GYDYDPGSNV VDVFVRALRR KVGAERIVTV RGMGYRLTG
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