Gene Ndas_4793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4793 
Symbol 
ID9248676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5680857 
End bp5681516 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content72% 
IMG OID 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003682683 
Protein GI297563709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.732153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCGCA TCCTCATCGT CGAGGACGAG GAGCGGATCG CCTCGTTCGT CCGCAAGGGC 
CTGGACGCCA GCGGGTTCAC CACCACCGTG GTGGGCACGG GGGCGGAGGC CGTGGACTAC
GCGGTGACCG GCGGGTTCGA CCTGATGCTG CTGGACCTGG GCCTGCCGGA CACCGACGGG
TTCGACGTGC TGCGGCGCGT GCGCTCGCTG GGCGTGGACA TCCCCGTGGT CATCCTGACC
GCGCGCGACG GCGTGCGGGA CACGGTGACC GGCCTGGAGA TCGGGGCCGA CGACTACGTC
ACCAAACCGT TCCGGTTCGA GGAACTGCTG GCCCGGGTGC GGCTGCGGAT GCGCAACGAG
CGTCCGACCG AGCTGACGGT GCTGCGCGCG GGCGGCCTGG CCCTGGACCT GCGCACGCGG
CGGGTGGCGG TGGAGGGGAC GTCCGTGGAC CTGACCGCGC GCGAGTTCTC CCTGCTGGAG
CTGCTGATGC GGCACCCGGG CCAGGTGCTC ACCAGGCAGC AGATGCTGTC GCACGTGTGG
GGCTACGACT ACGACCCCGG GTCGAACGTG GTGGACGTGT TCGTGCGGGC GCTGCGCCGC
AAGGTGGGCG CGGAGCGGAT CGTGACCGTG CGCGGGATGG GCTACCGGTT GACCGGGTGA
 
Protein sequence
MSRILIVEDE ERIASFVRKG LDASGFTTTV VGTGAEAVDY AVTGGFDLML LDLGLPDTDG 
FDVLRRVRSL GVDIPVVILT ARDGVRDTVT GLEIGADDYV TKPFRFEELL ARVRLRMRNE
RPTELTVLRA GGLALDLRTR RVAVEGTSVD LTAREFSLLE LLMRHPGQVL TRQQMLSHVW
GYDYDPGSNV VDVFVRALRR KVGAERIVTV RGMGYRLTG