Gene Ndas_4653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4653 
Symbol 
ID9248535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5527158 
End bp5528321 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content75% 
IMG OID 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_003682545 
Protein GI297563571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.224813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAGTC TCCGGCGGCT CCCCGAACTG TGGCAGCGAC TCGACGTCAC CCTCCGGGAC 
CTGCCCCTGG GGCTGCTGCT CCTGACCGCC TCGCTCATCC CGTCACTGCA CGGGCAGGGG
ACCGAGTTCG GCGGGGTGGC CGACCGCCCC CTCGACGCCC TGGGCCTGGT CGCGATCGCC
CTCCAGTCGC TGCCCCTGGC CGGGCGGCGG CGGTGGCCGA TCCTGACCCT GGCACTGGTG
GCGAGCGGCT TCGCCCTCGA CCAGCTCAAC GGTTACCACC TGTTCGCGGG CACCGCGCTG
CCCATCGCGC TGGTGAGCGC CGGCGCCCAC GTCCACCGGT ACCGGTGGAC CACCGTGCTC
GTGGCCTCGG CCGCCTACGT GGTGCTCTCG GTCGGGGTGG ACCGGCTCGG AACGGGTGAG
ACCCCGGCCG GGTACGTGAC GTTCTACGGG GCGCTGGCCC TGGCCTGGGG GGTCGGGGCA
TGGCTGCGCT CCACCCGCCT CGCCGAGGCC GAACGCCGCC GCCTCGTCGC CGAGGCCACC
CGCACCGCCG AACGCACCCG CATCGCCCGC GAACTCCACG ACGTCGTGAC CCACCACGTG
ACCGCCATGG TCGTGCAGGC CGAGTCGGCG CGCTACCTGA CCTCCGCGCC CGACCGGCTC
GACCAGACCC TGACCGCGGT CACCGACACC GGCAGGCGGG CCATCACCGA CCTGCGCCAC
CTGCTCGACC TGCTCAACCC CGACCACTCC ACCCCCGTCC CCGCCTCCGA CGAAGGGCTG
CTCACCGTGG TGGAGCAGAC GCGCCGGGCC GGGCAGCCGG TGGAGTTCAG CGAGGAGGGC
ACCCCGGCCT CCTCACGCGG CAGCGCCGAC CTCGTCGCGC ACCGCGTCGT GCAGGAGGCC
CTGACCAACG CCCTCAAGTA CGCGCACGGA AGCCCCACCA CCGTGCGGGT GCGCCACCGC
CCCGAGGAGA TCACCGTGAA CGTCAGCACC GACCACGCCG GGCCCCCGGG CGTCTCCCCC
GGCGGAAGCG GGCGGGGCCT GGTCGGCCTG CGCGAACGCG TCGAGGTCCT GGGCGGCGAC
TTCACCGCTG GCCCGCGCGA GGGCGGGGGA TTCGCCGTCC ACGCCCGCAT CCCCGCGCAC
GCCCCGGTGG GCGACCGGGC ATGA
 
Protein sequence
MTSLRRLPEL WQRLDVTLRD LPLGLLLLTA SLIPSLHGQG TEFGGVADRP LDALGLVAIA 
LQSLPLAGRR RWPILTLALV ASGFALDQLN GYHLFAGTAL PIALVSAGAH VHRYRWTTVL
VASAAYVVLS VGVDRLGTGE TPAGYVTFYG ALALAWGVGA WLRSTRLAEA ERRRLVAEAT
RTAERTRIAR ELHDVVTHHV TAMVVQAESA RYLTSAPDRL DQTLTAVTDT GRRAITDLRH
LLDLLNPDHS TPVPASDEGL LTVVEQTRRA GQPVEFSEEG TPASSRGSAD LVAHRVVQEA
LTNALKYAHG SPTTVRVRHR PEEITVNVST DHAGPPGVSP GGSGRGLVGL RERVEVLGGD
FTAGPREGGG FAVHARIPAH APVGDRA