Gene Ndas_4516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4516 
Symbol 
ID9248396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5354692 
End bp5359221 
Gene Length4530 bp 
Protein Length1509 aa 
Translation table11 
GC content74% 
IMG OID 
ProductNB-ARC domain protein 
Protein accessionYP_003682410 
Protein GI297563436 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.247222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCCG CGCACCAGCC GGGGGACGAC CGCCCCCGGG GCTCCGGCGA CCGGTCGGGC 
GGTTCCCCGG GTGGCCTCAC GCCCACGGAG TGGGCGGACG CGCTCCACCT GGCGGCCCTC
CAGGCGCGTG CCGAGGCCGC GCGCCGCGAC CGCCCGATCT TCACGGCGCC GCCCGCCGAC
GGTCCGCCGC CCGGGGAGGC CGCCGGTTCC GGTCCGCCCC CGAGGGAGGC CGGGACGGGG
ACGGACGCGC CGGGGACCGA GCGGTCCTCC CCTGCGCCCG GCACGGACAC CGGGACCGCC
CGGTCCCCGG GGCTCCCCGC CGGCGGGGGC GGTTCCGCCG CCGGGCGCGT GCCCCGTGGG
CGGGCCCCGG CCCCGCCGCA CGGCGGTGAG GGGACGCCCC CGTGGCCGCA CCGGGACCCG
GGGGACGGCG GGCCGCCGAC GGAGCCCCCC GGGTTCGTCC AGCCGGTCCT GGAACGGCGC
CAGGAACTGG TCGCCGCACT GGGTCCCTTC CACCTGACCG AACCCCGTGG GCGGCCGGAC
GGCGTCGACC CGGAGGGCAC CGCGCGCAAC TACGCGCGCT CGCTCCTGGA CAGCCTCCAC
TGGTCCGAGG ACGAGCGCGA GGGCGCCGGC GTCCCGGTGG TGCCGCGGCC GTGCGCGCGC
CGGGAACGGG CGGTCAACCT GACCCTCCTC GTCGACGACG GCGTCACCAT GGCCTTCCAG
CGCGGCCTGG CCGCCGAGTT CGTCCGGCTC GCGCGCTCCG GCGGGATCTT CCGCGAGGTC
GCCTCCCTGT ACTTCGACTC CGCGCGCCCC GGCGTCCCCA GGCTGCGCGA CGGCCACGGA
CGCCCCGGCC GCCTCGGCGG CGGCCGCGCG CACGTGGTCC TGTTCCTCAC CGACGGGCTC
GGCGGCGCCT GGCGCGACCG CGGCTTCCAG GACTGGGTCG CCGAGGCCGC GGACCGCGGC
GCGGTCGCGA TCCTCCACCT GCTCCAGCCC CTCCTGTGGC GGCGCGGCGC CATCGCCACC
GTCCCCATGG AGCTGGCCGC GCCCCGGGCC GCCGGTCCCT GCGCCGCGAA CACCCGGTAC
GCGCGGGAGC GCACCCTCAC CGACCCGGAG GAGGACAAGC GCGAGCCGGG GGTGCTCGTG
CCGGTGCTGA CGCTGGATCC CCGGACGATC CGCGACTGGG CGGTCTTCGC GATGGGCAGG
GGCCCCGGAC GCCTGTGGGC GCACACCGCG CGGTTCCCCG CGGGAGAGGA CCCCGCCCCC
GCCGAGGCTC CGGACGCCGG GGAACCCGCC TTCGACGCCG AACGGGAGGC GCGGCGCTTC
CGGCAGCTGG CCAGTCCCGA GGCGTTCGAC CTGGCGGTGG CCCTGGCCGC CGTGCCGCTG
GACCCGCGTC TGGTGGAGGC GGTCTGCGAG GACGTGCTCG GCCGCACCAC GCCCTCGGAG
CTGACGGAGG TCTTCTTCAG CGGGCTGGTG CGCGGGGGCG GCGGGGGGGA GGAGGACGGG
CCGGTCGGGT GGGACTTCCG CCCGGGGGTC CGGAGGGCCC TGCTGTCGCT GGGCGGCCGG
GTCTCCGACA TCCGCCGGGT GCTGGGCCTG GCGGCGGAGC GCCTGCGCCG GGTGGACCCC
TGGTTCGACG CCCTGCGCCT GATGCTGCGG GGCGGGAACG ACGACTTCCC GAAAAGGACG
CGGCTGTCCC ACCACTGGGC GAATTCCATG CTCCCGGCGG TGGAGAGCGC GGCCCTCACC
CGACGTTATG CCGCGCCCAT CAGGGAATAC GCCGATATCT CCGGGACGGG TGCGACCCGC
GGTGCGGAAG AAACGCATGA GGCGGGTACG CCGTCGCCCG CTGGTCTAGT ATTACCGAAG
GTTTCCGGAT CTGCGCGTGT GGGTGGGAAC AACGGCTGGA AGGCGCGGAA CAGAGCACCC
TTTTCTGAAC GGTCGGGGAA AGAAACTCAT ATGGCCACAA AACTGTCAAA TGAGGATATG
ATGCAAGAAT CTGGCGGCCA GTCCAGCGGT CGTACGTCCC GATCGTCCAT GAGTGGCCGA
CCGCTCAACG CGGTCTGGGT CCAGGTTCCG CGCCGCAACA GCGCCTTCAC CGGCCGGGAG
GAACTCCTCT CCGCGCTGAG GGGACAGCTC CTGAAGGGGC GGCGCCAGGT CATCACCGCC
CTCAACGGGA TGTCGGGGGT CGGCAAGACC GAGCTCGCCA AGGAGTACCT GTACCGGTAC
GCGTCCGACT ACGACCTCAT CTGCTGGATC CCCGCGGCCC ACAGCAACCA GCTGAGGGAG
AGCTTCTCCG TCCTCGCGTC CAGGCTCAGG CTGGACAGCG CGGGCGCGGG CAGCGGACAC
GTCCTGGAGA ACGTCCTGGA GGCACTGCGC CAGGGCGTGG ACTATCCGCG CTGGCTCCTC
GTCTTCGACA ACGCGCAGGC CCGGTCCGAA CTGGATCAGT ATCTTCCTGT CGGGGGCGAG
GGCCACGTGA TCATCACTTC TCGGGACTCC AGCTGGACGG TGCGGGGCGG CGACGCCTAC
CTCTCCGTCC GCGAGTTCGA CCGGGCGGAG AGCATCGAGC TGCTGAAACG GCGCGGACCC
GCGTCGCTGA CCACCGAGGA GGCCGACCAG CTGGCGCACG AGCTGGGCGA CCTGCCGCTG
GCCCTCAACC AGGCCGCCGT GTGGCTGCAC GAGAGCGGGA TGGCCACCGA GGAGTACCTG
CGCCAGTTCG CCGAGAAGAG CCAGGAGATG CTCGACCTCC TGCGCCCGGT GGACAGCGCC
TACCCGGTGG CCGTCGCCGC CGCCTGGAAC GTGTCCCTGG ACCGGCTGGC CACCACCAAC
CCGGCGGCGC TCCAGCTGCT CCAGCTCTGC TCCTTCATGT CGACGGCGCC CATCCCCCGG
ACGCTGTTCA ACTTCGCCCG GGGCATCGAG GGTCCCGCGG AGCTGCGCGG CGCCCTGGAG
GACCCGGCCA GGCTCGGCAT GGCGATCCGC GACATCGGGC GCAACAGCCT CGCCCACATC
GACCACCAGC GCAACACGGT CTCCCTGCAC CGGCTGGTGC AGCGCGCCGT CCAGGCGCCG
ATGAGCGACG AGGAGCGCGA GGAGATGCGC CACTGCGCCC ACCAGCTGCT GGGCCGCAAC
GACCTCCAGG TGGTGGCCGT GGACGCCTCC GAGCGCTACA CCGAGCTGCT GCCGCACGTG
TGGGCCTCCG AACTGTGGAA CTGCACCGAC CCCTGGGCGC GCAACCTGGT GGTGCAGATG
TGCCGGGTCG CCGTGCTGCG CCAGGAGTTC GACGAGGCCC GCCGCCTGGG CGAGACCGCC
CACGAGTGGT GGCGCCTGCA ACTGGGCGAG AACCACCCCT CCACCCTGGG CATGGCGATC
CAGATCTCCA CGGCGATGCG CGGGCAGGGG TACCTGGAGC AGGCCCTCGC GCTGTGCGAG
GCCACCCTGG GCACCCTGCG CGAGACGCAG AACCCCGGGG ACTCCGAGAC CCTGGAGGCG
GAGATCGAGT ACATCCGCAC CCTGCGCTTC CTGGGCCGGT TCCGCGACTC GCTGACGGCC
GCGGCCGACG CCTACCACCG CCGGGTGCGC CTCTTCGGCG AGGACGACCC GCACACCCTG
GTCACCGCCC ACTTCCGCGC CTTCAACCTC CTGCTCAGCG GCGACCCGGA GTCGGCCGCC
GACCAGTACC GCGACACGCT GGCCCGTCTG GAGGCCGTCT TCGGCCCGGA CCACCCGCGC
ACCCTGGGCA CCAACAACGG CTACGCCGAG GCCCTGATGG AGAAGGGCCG CTACCGGGAG
GCCGAGGAGA TCCAGGCCCA CCAGGTCGAG CGGGCCATCG GCCTGATCGG GGAGGACGAC
AACCGCGTCC TGCGCAACCA GCGGACGCTG GCCGTCATGC GCCGGCGCGT CGGCCACCAT
CGGGAGGCGC TCGCCCTGTC GGAGCGCGCC TGGCAGCGCT TCCGGGTCAA GCACGGCGTG
GACGACAACG AGACCATGTA CGCCGCTCTG GTGCACTCCA TGTCCCTGAG CGCGGTCAAC
CAGCACGACG AGGCGCTGGA GCTGGCCCAG ACCACGGGGG AGCGCTACGT CAAGCTCCTG
GGCGAACGCC ACCCCTACGT GGGCGCGGCG GACGTCAACC GGGCGATCAT CCTGCGCCGC
CTGGGCAGGG CGGCCGAGGC CCGCCAGCTG GACGAGCGCT CCCTGGAGCT GTTCCTGGAC
CGGCTCGGCG CCCACCACCC CAGCACCCTG GCCTGCCTGG TGAACCTGGC CAACGACCAC
TTCCTCATGG GCGACGTGGC CGGTGCCCGG GAACGGGACG AGGAGGCGCT GCGCGGCTGC
GAGGAGGCGC TGGGGGCCCC GCATCCGCTG GCCCTGCTGG CCCGCCGCAA CCTGCTCGTG
GACCGCAGGG CCCAGGGCGA GGACGTCGAG GCCGAGTTCG TCGCCGTGGA GGACGGCTAC
CGCGAGGTGA TGGGGTCGGA CCACCCCGCC ACGCTCAGCC TCCGCAGGAC CGTGCGGGGG
GACGCCGACA TCTACCTCGC CCAGATGTGA
 
Protein sequence
MSPAHQPGDD RPRGSGDRSG GSPGGLTPTE WADALHLAAL QARAEAARRD RPIFTAPPAD 
GPPPGEAAGS GPPPREAGTG TDAPGTERSS PAPGTDTGTA RSPGLPAGGG GSAAGRVPRG
RAPAPPHGGE GTPPWPHRDP GDGGPPTEPP GFVQPVLERR QELVAALGPF HLTEPRGRPD
GVDPEGTARN YARSLLDSLH WSEDEREGAG VPVVPRPCAR RERAVNLTLL VDDGVTMAFQ
RGLAAEFVRL ARSGGIFREV ASLYFDSARP GVPRLRDGHG RPGRLGGGRA HVVLFLTDGL
GGAWRDRGFQ DWVAEAADRG AVAILHLLQP LLWRRGAIAT VPMELAAPRA AGPCAANTRY
ARERTLTDPE EDKREPGVLV PVLTLDPRTI RDWAVFAMGR GPGRLWAHTA RFPAGEDPAP
AEAPDAGEPA FDAEREARRF RQLASPEAFD LAVALAAVPL DPRLVEAVCE DVLGRTTPSE
LTEVFFSGLV RGGGGGEEDG PVGWDFRPGV RRALLSLGGR VSDIRRVLGL AAERLRRVDP
WFDALRLMLR GGNDDFPKRT RLSHHWANSM LPAVESAALT RRYAAPIREY ADISGTGATR
GAEETHEAGT PSPAGLVLPK VSGSARVGGN NGWKARNRAP FSERSGKETH MATKLSNEDM
MQESGGQSSG RTSRSSMSGR PLNAVWVQVP RRNSAFTGRE ELLSALRGQL LKGRRQVITA
LNGMSGVGKT ELAKEYLYRY ASDYDLICWI PAAHSNQLRE SFSVLASRLR LDSAGAGSGH
VLENVLEALR QGVDYPRWLL VFDNAQARSE LDQYLPVGGE GHVIITSRDS SWTVRGGDAY
LSVREFDRAE SIELLKRRGP ASLTTEEADQ LAHELGDLPL ALNQAAVWLH ESGMATEEYL
RQFAEKSQEM LDLLRPVDSA YPVAVAAAWN VSLDRLATTN PAALQLLQLC SFMSTAPIPR
TLFNFARGIE GPAELRGALE DPARLGMAIR DIGRNSLAHI DHQRNTVSLH RLVQRAVQAP
MSDEEREEMR HCAHQLLGRN DLQVVAVDAS ERYTELLPHV WASELWNCTD PWARNLVVQM
CRVAVLRQEF DEARRLGETA HEWWRLQLGE NHPSTLGMAI QISTAMRGQG YLEQALALCE
ATLGTLRETQ NPGDSETLEA EIEYIRTLRF LGRFRDSLTA AADAYHRRVR LFGEDDPHTL
VTAHFRAFNL LLSGDPESAA DQYRDTLARL EAVFGPDHPR TLGTNNGYAE ALMEKGRYRE
AEEIQAHQVE RAIGLIGEDD NRVLRNQRTL AVMRRRVGHH REALALSERA WQRFRVKHGV
DDNETMYAAL VHSMSLSAVN QHDEALELAQ TTGERYVKLL GERHPYVGAA DVNRAIILRR
LGRAAEARQL DERSLELFLD RLGAHHPSTL ACLVNLANDH FLMGDVAGAR ERDEEALRGC
EEALGAPHPL ALLARRNLLV DRRAQGEDVE AEFVAVEDGY REVMGSDHPA TLSLRRTVRG
DADIYLAQM