Gene Ndas_4512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4512 
Symbol 
ID9248392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5350643 
End bp5351542 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content74% 
IMG OID 
ProductTRAP transporter solute receptor, TAXI family 
Protein accessionYP_003682406 
Protein GI297563432 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCATCA CGGCCGCGCT GGGCGGCTGC TCGTGGCGCG AACCCTCCAC CGCTCCGGCG 
TCGCTCGTCG TGGCCACGGG CCCGGCCGGG GCCGTCTACC GGGAGATCGG CTCGGAGATC
GCGGGGCTGC TGGACGCCCG GTTCCCCGAC ATCCGGGTGG AGGCCGTCGA GACCGGCGCC
TCGCACGACA ACCTGCTGCT CATCGAGTCG GGCGAGGCCC ACCTGGGTCT GACCAGCCTC
GACGCGGTCC TGGCCGACGA GGAGGCCGAC ACCGGCCCCT TCCGCGCGAT CGGGCGCCTC
TACGACAGCT TCCTGCACCT CATGGTCCTG GACGCCTCCC CCGTGCGCTC CCTGTCCGAC
CTGGAGGGCC GCCGCGTCTC GGTGGGGGCG GTCAACTCCG GCACCGAGTT CACCGTCGCG
CAGGCCGCCG AGGAGACCGG ACTGGCCATG GAGACGGTGC GCCTGGACCA GGCGGCCTCC
GCCGACGCCC TGGCCCGTGG GGAGATCGAC GCGATGTTCT CCCTGACCGG ACTGCCCACG
CCCGCGGTCG CCGACCTGGC CCGTGAGCAC GTGACGCGCC TGGTCGACCT CGGGGACGTC
GCCTCCGCCA TGGCCGAGGC CCACCCCGAG AGGTACTTCC CGGCCACCAT CCCGGCGACC
ACCTACGAGG GCGTGCCCGC CTGCCCCACC CTGTCCATCC CCAACCTGCT GCTGTGCGCC
GCCGACCTGC CGGACGACCT GGCCTACTCC GTCACCGACA CCGTCTACAC CGGCGCCGCG
CGGATCGCCG ACTCCCGTCC CGAGGCGGCG CAGATCAACG TGCGCACCGG CATCTCGACC
GGCGTGGTCC CCCTCCACCC CGGCGCCGCG CGCTGGTACC GGGACAACAA GCCCTCCTGA
 
Protein sequence
MFITAALGGC SWREPSTAPA SLVVATGPAG AVYREIGSEI AGLLDARFPD IRVEAVETGA 
SHDNLLLIES GEAHLGLTSL DAVLADEEAD TGPFRAIGRL YDSFLHLMVL DASPVRSLSD
LEGRRVSVGA VNSGTEFTVA QAAEETGLAM ETVRLDQAAS ADALARGEID AMFSLTGLPT
PAVADLAREH VTRLVDLGDV ASAMAEAHPE RYFPATIPAT TYEGVPACPT LSIPNLLLCA
ADLPDDLAYS VTDTVYTGAA RIADSRPEAA QINVRTGIST GVVPLHPGAA RWYRDNKPS