Gene Ndas_4504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4504 
Symbol 
ID9248384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5340058 
End bp5340903 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content70% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003682398 
Protein GI297563424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA GCACACCCGT CCGGCCCCGC CCCGAGGGCG AGGCCTCCCC GAAGCGCGGT 
GCCGCGCGCC GGCGCCGCTT CGGCCTCAGG CTCAGCGTGT GGCTGCCCAC CGCCGTGGCG
GTGGTGATCG TCGGCTTCGC CTGGTCGGCG ACCGCCGAGG ACCAGCCCTA CCTCCTGCCT
CCGCTGGCGG AGGTCGGGGG GATCCTGGTC GAGGATCCGC TGCTGTTCGT GAACAACGCC
TGGGCCACCC TCAGCATCGC CCTGACGGGC GTGGCCTTCG GCGCGGGCAC CGCGTTCGTC
CTGGCCCTGC TGATGTCGGA GATCCCGCTG CTGCGGCGCG CGATCATGCC GCTCGCCGTC
ATCCTGAACG TGACCCCGGT CATCGCGATC GCCCCCGCCC TGGTGGTGGC GTTCGGCTTC
GGCATGACCC CCAAGGTCAT CGTCACCGCG ATCATCACGT TCTTCCCGGT GCTCATCAAC
GTGACCACGG GGCTGCGGTC GGTCTCCCGG CCCGTCCTGC ACGTCTTCTC CACCCTGCAC
GCCTCCCGCC TGGAGGTGCT GCTCCGGCTG CGTATCCCCA GCAGCCTCCC CTACACCCTC
GCCGCTCTGC GGGTGGTGTT CCCCCTGTCC ATCGTGGGCG CCGTGGTCGC GGAGTTCGTC
GCCGCCGGAT CCTCAAGCGG GCTCGGCACG ATGATCCGCA ACTCGGCCGC GACCGCCCGG
TTGGAGTACG TCTACGCGGC CGTCGCCTGT CTGGCCGTCA TGGGCGTGCT GATGCTCGCA
CTCATCACCG TCCTCGAACG CAGACTGCTG TTCTGGCACG AGTCCCAGCA GCGCACCACC
TCCTAA
 
Protein sequence
MATSTPVRPR PEGEASPKRG AARRRRFGLR LSVWLPTAVA VVIVGFAWSA TAEDQPYLLP 
PLAEVGGILV EDPLLFVNNA WATLSIALTG VAFGAGTAFV LALLMSEIPL LRRAIMPLAV
ILNVTPVIAI APALVVAFGF GMTPKVIVTA IITFFPVLIN VTTGLRSVSR PVLHVFSTLH
ASRLEVLLRL RIPSSLPYTL AALRVVFPLS IVGAVVAEFV AAGSSSGLGT MIRNSAATAR
LEYVYAAVAC LAVMGVLMLA LITVLERRLL FWHESQQRTT S