Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4504 |
Symbol | |
ID | 9248384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 5340058 |
End bp | 5340903 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003682398 |
Protein GI | 297563424 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCA GCACACCCGT CCGGCCCCGC CCCGAGGGCG AGGCCTCCCC GAAGCGCGGT GCCGCGCGCC GGCGCCGCTT CGGCCTCAGG CTCAGCGTGT GGCTGCCCAC CGCCGTGGCG GTGGTGATCG TCGGCTTCGC CTGGTCGGCG ACCGCCGAGG ACCAGCCCTA CCTCCTGCCT CCGCTGGCGG AGGTCGGGGG GATCCTGGTC GAGGATCCGC TGCTGTTCGT GAACAACGCC TGGGCCACCC TCAGCATCGC CCTGACGGGC GTGGCCTTCG GCGCGGGCAC CGCGTTCGTC CTGGCCCTGC TGATGTCGGA GATCCCGCTG CTGCGGCGCG CGATCATGCC GCTCGCCGTC ATCCTGAACG TGACCCCGGT CATCGCGATC GCCCCCGCCC TGGTGGTGGC GTTCGGCTTC GGCATGACCC CCAAGGTCAT CGTCACCGCG ATCATCACGT TCTTCCCGGT GCTCATCAAC GTGACCACGG GGCTGCGGTC GGTCTCCCGG CCCGTCCTGC ACGTCTTCTC CACCCTGCAC GCCTCCCGCC TGGAGGTGCT GCTCCGGCTG CGTATCCCCA GCAGCCTCCC CTACACCCTC GCCGCTCTGC GGGTGGTGTT CCCCCTGTCC ATCGTGGGCG CCGTGGTCGC GGAGTTCGTC GCCGCCGGAT CCTCAAGCGG GCTCGGCACG ATGATCCGCA ACTCGGCCGC GACCGCCCGG TTGGAGTACG TCTACGCGGC CGTCGCCTGT CTGGCCGTCA TGGGCGTGCT GATGCTCGCA CTCATCACCG TCCTCGAACG CAGACTGCTG TTCTGGCACG AGTCCCAGCA GCGCACCACC TCCTAA
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Protein sequence | MATSTPVRPR PEGEASPKRG AARRRRFGLR LSVWLPTAVA VVIVGFAWSA TAEDQPYLLP PLAEVGGILV EDPLLFVNNA WATLSIALTG VAFGAGTAFV LALLMSEIPL LRRAIMPLAV ILNVTPVIAI APALVVAFGF GMTPKVIVTA IITFFPVLIN VTTGLRSVSR PVLHVFSTLH ASRLEVLLRL RIPSSLPYTL AALRVVFPLS IVGAVVAEFV AAGSSSGLGT MIRNSAATAR LEYVYAAVAC LAVMGVLMLA LITVLERRLL FWHESQQRTT S
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