Gene Ndas_4313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4313 
Symbol 
ID9248188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5145458 
End bp5146420 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content75% 
IMG OID 
ProductRNA methyltransferase, TrmH family, group 3 
Protein accessionYP_003682208 
Protein GI297563234 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCGA AGAAGAGCAA GAAGGGCCCG ACCAAGGGCA GCGGAGGCAA GGGCCGCCGC 
TCGCTGGAGG GCAAGAGCGG CACCCTGCCC GCCGAGCAGC GGCACTGGTA CGAGGGCAAG
CAGCGGGCCA GGGCCGCCCG CCGCCCCGAC TCCGGAGGCG GTGCCCGGGG CCCGCAGCAG
GGGGAGCGCC GCCGTGCGGA CGCCTCCGAC CTGCTGGTGG GGCGCAACCC GGTGGTGGAG
GCGCTGCGCG CCGGCATGCC CGCCACCCGC CTGTTCCTGG CCAACAGCCT CGACCCGGAC
GAGCGCGTCA ACGAGGCGGC CCGGATCGCC GGTGAGCGCG GCCTGGACGT GCTGGAGGTC
ACCAAGACCG AGCTCGACCG CCGCTGCGAG AGCAACGGCC AGCCCGGCGC GGCCCACCAG
GGGCTCGCGC TCCAGGTGCG CCCCTACCAG TACCGCGCGC CCGAGGCCCT GCTGGACACG
GCGCTGGAGT CCGACACCCC GGCGCTGATC GTGGCCCTGG ACGGGGTGAC CGACCCGCAC
AACCTCGGCG CCATCGCGCG TTCGGCCGCC GCGTTCAACG CGCACGGCCT GCTCATCCCC
GAGCGCCGCT CGGCCGGGGT CAACCTCACC GCCTGGAAGA CCTCCGCGGG CACCCTCGCC
CGGCTGCCCG TGGCCCAGGC CACCAACCTG ACCCGCGCGC TGGAGGGCTA CAAGAAGGAG
GGCGTGTTCG TCGTCGGCCT CGACGCCGGC GGCGACACCC CCATCCCGGA CCTGGAGCTG
GCCACCGGCC CGCTGGTCAT CGTGATCGGC TCCGAGGGCA AGGGCCTGTC CCGCCTGGTG
CGCGAGGCCT GCGACGTGGT CGCGAGCATC CCGATCGGCA ACGCGGAGTC GCTGAACGCC
TCCGTGGCCG CCGGGGTGTC CCTCTACGAG GTGGCCCGCC GCCGCTCCGC CGCGAAGGGG
TAG
 
Protein sequence
MPAKKSKKGP TKGSGGKGRR SLEGKSGTLP AEQRHWYEGK QRARAARRPD SGGGARGPQQ 
GERRRADASD LLVGRNPVVE ALRAGMPATR LFLANSLDPD ERVNEAARIA GERGLDVLEV
TKTELDRRCE SNGQPGAAHQ GLALQVRPYQ YRAPEALLDT ALESDTPALI VALDGVTDPH
NLGAIARSAA AFNAHGLLIP ERRSAGVNLT AWKTSAGTLA RLPVAQATNL TRALEGYKKE
GVFVVGLDAG GDTPIPDLEL ATGPLVIVIG SEGKGLSRLV REACDVVASI PIGNAESLNA
SVAAGVSLYE VARRRSAAKG