| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4249 |
|---|
| Symbol | |
|---|
| ID | 9248123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 5065557 |
|---|
| End bp | 5066495 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003682144 |
|---|
| Protein GI | 297563170 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.3435 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.21236 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGCCG TGGACAGCCC GGGTGCGCTC GCCTACCGTG GCGCAATGGA CACCACAGCG
GTCAGCATCC CCGACCTGAG CGGCCGTACG GCGGTCGTCA CCGGAGCCAA CAGCGGCCTG
GGCATCGAGA CCACACGCGT CCTGGCCCGT GCGGGCGCGC GCGTCGTGAT GGCCGTGCGC
GACGTGGCCA AGGGGCGCGC CGAGGCCGCC GGGGTGCGGG GTGACACCGA GGTGCGCCAC
CTGGACCTGG CGGACCTGGC GTCCGTGCGC GCCTTCGCCG AGGCCTGGAA CGGCGACCTC
CACCTGCTCA TCAACAACGC GGGTGTCATG GCGGTCGCCA AGGGCGTGAC CAAGGACGGG
TTCGAGACAC AGTTCGGCGT CAACCACCTC GGCCACTTCG CCCTGACCAA CCTGCTCCTG
GAACACGTCA CCGGACGGGT GGTCACCCTC TCCTCCGGAA TGCACCGCAT GGCCCGGGGC
ATCGACTTCG ACGACGTCAA CCTGGACCGC GGCTACACGC CCTACCGGGC CTACAACCAG
TCCAAGCTCG CCAACCTGCT GTTCACACTG GAGCTCCAGC GCCGCCTGGA CGCGGTGGGC
TCCCCCGTGC TCTCCACCGC CGCCCACCCC GGCTACGCGG CCACCAACCT CCAGAGCCAC
GGGGCCAACC CGATCTCCAG GGCGGCCCTC ATGCTCGGCA ACAGGGTCTT CGCCCAGAGC
GCCGCCAACG GCGCCCTCCC CACGATCTAC GCCGCCACCC AGGACGTGCC CGGCGCGGCC
TTCGCCGGAC CCAAGGCCAT GGGCGGCACG CGCGGCGCCC CCGCCCTGTC CAGCCGGAGC
GAGGCCGCCT GGGACGGTCG CGCCGCCAAG CGCCTGTGGA CGCTGTCGGA GGAGATGACC
GGGGTGAGCT TCCCGCTGCG GTCGTCCGAC CCGGTCTGA
|
|---|
| Protein sequence | MAAVDSPGAL AYRGAMDTTA VSIPDLSGRT AVVTGANSGL GIETTRVLAR AGARVVMAVR
DVAKGRAEAA GVRGDTEVRH LDLADLASVR AFAEAWNGDL HLLINNAGVM AVAKGVTKDG
FETQFGVNHL GHFALTNLLL EHVTGRVVTL SSGMHRMARG IDFDDVNLDR GYTPYRAYNQ
SKLANLLFTL ELQRRLDAVG SPVLSTAAHP GYAATNLQSH GANPISRAAL MLGNRVFAQS
AANGALPTIY AATQDVPGAA FAGPKAMGGT RGAPALSSRS EAAWDGRAAK RLWTLSEEMT
GVSFPLRSSD PV
|
|---|
| |