Gene Ndas_4127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4127 
Symbol 
ID9248001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4928571 
End bp4930256 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content69% 
IMG OID 
ProductSSS sodium solute transporter superfamily 
Protein accessionYP_003682028 
Protein GI297563054 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCG CCCAGGAAGC TGTCAAGACG GTCAGCGACA GCAGCCGCAT CATCACCATC 
GTCCTCTTCG TCCTCATGAT CGCGGCCACG CTCGGCATCA CCGTCTGGGC CGGCCGCAGC
ACGCGCTCCG CCACCGACTT CCATTCGGGC GGGCGCGGCT TCTCCCCGCT CCAGAACGGC
CTGGCGATCG GCAGCGACTA CATGTCCGCC GCGTCCTTCC TGGGCATCGC GGGCATGATC
GCGCTGTTCG GCTACGACGG CTTCCTCTAC TCCATCGGGT TCCTCGTCGC CTGGCTCGTC
GCCCTCCTGC TGGTCGCGGA GCTGCTGCGC AACTCCGGCC GCTACACCAT GGGTGACGTG
CTGTCCTACC GGATGCGGCA GCGCCCGGTG CGCACCGCCG CGTCGGTCTC CACGATCGTG
GTGTCGATCT TCTACCTGCT GGCGCAGATG GTCGGCGCGG GCGCGCTCAT CGCCCTGCTG
CTGGGCATCC AGCCCGGGCA GACCTTCATG GGCATGGACG CCGCCACCGC CAAGATCGTC
GGCATCGTGG TCATCGGTCT GCTGATGACC ATCTACGTGA CCTTCGGCGG CATGAAGGGC
ACCACCTGGG TGCAGATCAT CAAGGCCCTC ATCCTCATGC TGGGCGCCGC CCTGCTCACC
GTGCTGACCC TGTCCCTGTA CGGGTTCAAC CTCGGCGCGC TGATGAGCGA CGCCGCCGCG
GCCAGCGGCC AGGAGGGCTT CCTGGAGCCC GGCCTGCGCT ACGGGGTGGA GGTCGCGGGC
GACCCGCTCC AGACCCTGTG GAACAAGCTG GACCTGATCA GCCTGGGCCT GGCCCTGGTG
CTGGGCACGG CCGGCCTGCC GCACATCCTC ATCCGCTTCT ACACCGTCCC CGACTCCCAG
AGCGCCCGCA AGTCGGTCAA CTGGGGCATC GGCCTCATCG GCACCTTCTA CCTGATGACC
CTGGTGCTCG GCTTCGGCGC GGCGGCCATC GTCGGCCACG AGGCCATCAC GGCGCAGGAC
GCCGCGGGCA ATACCGCGGC CCCGCAGCTG GCCCAGGTGG TCGGCGAGCG CATCGGCGGC
GAGATGGCGG GCGCGGTCCT GCTGGCGATC ATCGCCTCGG CGGCCTTCGC GGCCATCCTG
TCCACGGTGG CGGGCCTGGT CATCGCCTCC TCGTCCTCCA TCGCGCACGA CTTCTACAAC
TCGGTCCTGC GCAAGGGCAG GGCCACGGGC GCCGAGGAGG TCCGGGTCGC CCGCCTGTCC
GCCCTGGGCG TCGGCGTGGT CTCGATCCTG CTGGCGGTGT TCGCACAGAA CCTCAACGTG
GCCTTCCTGG TCTCGCTGGC GTTCGCGATG GCGGCCTCGG CGAACCTGCC GACCCTGCTG
CTCAGCCTGT TCTGGAAGAG GTTCAACACC CGCGGCGCCC TCGCGGGCAT CTACGGCGGC
CTGATCAGCG CCGTGGGCCT GGTGTTCTTC TCGCCCGTGG TCTCCGGCAG CGAGACCGCG
CTCATCCCGA CCGCGGACTT CGCCTGGTTC CCGCTGCCCA ACCCGGCCCT GGTGTCGGTG
CCGATCAGCC TGCTGTGCGC GATCGTGGGA ACCCTGTCGT CCAAGGAGCG CGACTTCGAC
AAGTTCGCCC AGCTCCAGGT CCGCGCCCTG ACCGGCGCGG GCGCGGAGAA GGCGGCCAAC
CACTAG
 
Protein sequence
MNLAQEAVKT VSDSSRIITI VLFVLMIAAT LGITVWAGRS TRSATDFHSG GRGFSPLQNG 
LAIGSDYMSA ASFLGIAGMI ALFGYDGFLY SIGFLVAWLV ALLLVAELLR NSGRYTMGDV
LSYRMRQRPV RTAASVSTIV VSIFYLLAQM VGAGALIALL LGIQPGQTFM GMDAATAKIV
GIVVIGLLMT IYVTFGGMKG TTWVQIIKAL ILMLGAALLT VLTLSLYGFN LGALMSDAAA
ASGQEGFLEP GLRYGVEVAG DPLQTLWNKL DLISLGLALV LGTAGLPHIL IRFYTVPDSQ
SARKSVNWGI GLIGTFYLMT LVLGFGAAAI VGHEAITAQD AAGNTAAPQL AQVVGERIGG
EMAGAVLLAI IASAAFAAIL STVAGLVIAS SSSIAHDFYN SVLRKGRATG AEEVRVARLS
ALGVGVVSIL LAVFAQNLNV AFLVSLAFAM AASANLPTLL LSLFWKRFNT RGALAGIYGG
LISAVGLVFF SPVVSGSETA LIPTADFAWF PLPNPALVSV PISLLCAIVG TLSSKERDFD
KFAQLQVRAL TGAGAEKAAN H