Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4043 |
Symbol | |
ID | 9247915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 4835950 |
End bp | 4836627 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | peptidase M22 glycoprotease |
Protein accession | YP_003681946 |
Protein GI | 297562972 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTCCTCC TGGCCTTCGA CACCGCCACC CCGGCGGTCA CCGCCGCCAT CGGCGAGACC GGCGCCGACG GCTCCTTCAC GCTGCGCGCC AGCGCCGGCT CCGTGGACGC CCGCCGCCAC GGCGAACTGC TCGGCCCCAC GATCGCCCGG CTCACCGAGG AGGCCGGGAT CGTCCTGGCC GACCTCGACC ACGTCGCCGT CGGCATCGGT CCCGGGCCCT ACACCGGCCT GCGGGTCGGG CTGGCCACCG CGCACGCCCT GGCCGACGCC CTCGGCGTCC CCTGCCACGG CGTCACCACC CTGGACGCGC TGGCCTTCGC CACCGGGCGG ACCGAACCCT TCGTCGCGAT GACCGACGCC CGCCGCAAGG AGGTGTTCTG GGCCCGCTAC GACGACCGCC TCACCCGCGT GGGCGAGGTG CGCGTGGACC GCCCCGCCGA GGTGGACACC GGCGGGCTCG CGCTGGTCGG CGACGGCGCC CGCATGTACG CCGACGTGTT CGGCGCCGGT TCCGCCGCGC CGGACCCGCT GCACCCGGAC GCCGCAGCCA TGGCGGAGCT GGCACTGCTG CGCCTGGGCC GCGGCGAGGA GCTGCCCGCG CCCAACCCGC TCTACCTGCG CCGTCCGGAC GCGGTGGAGC CCGGTGCCCC GAAGAAGGTG CGCCAGTGGG TGAAGTGA
|
Protein sequence | MLLLAFDTAT PAVTAAIGET GADGSFTLRA SAGSVDARRH GELLGPTIAR LTEEAGIVLA DLDHVAVGIG PGPYTGLRVG LATAHALADA LGVPCHGVTT LDALAFATGR TEPFVAMTDA RRKEVFWARY DDRLTRVGEV RVDRPAEVDT GGLALVGDGA RMYADVFGAG SAAPDPLHPD AAAMAELALL RLGRGEELPA PNPLYLRRPD AVEPGAPKKV RQWVK
|
| |