| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3911 |
|---|
| Symbol | |
|---|
| ID | 9247782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 4685356 |
|---|
| End bp | 4687254 |
|---|
| Gene Length | 1899 bp |
|---|
| Protein Length | 632 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003681814 |
|---|
| Protein GI | 297562840 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCCCG GTTCCGCGCC GCCTCCCCTG CCGCCCGGTG TGCTACCGCT CGCCTCCGAC
GAGCCCCGGC GCGTCGGCCC CTTCCGGGTG GTGGGCCGGA TCGGTTCGGG AGGCATGGGC
GTGGTCTACG CGGCGCTGGA CGACGCCGAC CGGCGGGTGG CGGTCAAGTG CGTGCACCGG
GTCTACGCGG GCGACGGTGA GTTCCGGGAG CGCTTCGCCC GGGAGGTCGC CCTGGTGCGT
CGGGTGCGCG CGGCCTGCGT GCCCGGTTTC CTGGGCGCCG ACACCCGTGC CGAGGTCCCC
TGGCTGGCCA CCGAGTACGT CCCCGGACCG ACCCTGGACG CCCGTGTACG GGCCCGCGGA
CCGCTCACCG GAGCGGCCCT CACCGCGTTC GCGCTGGGCG TGGCCGAGGC CCTGACCGCG
ATCCACGGCG CGGGCGTGGT GCACCGCGAC CTCAAGCCCG GCAACGTGAT CCTGTCCCCG
GGCGGCCCGA GGGTGCTGGA CTTCGGTATC GCGCGGACGG TCGACGGCAC CGCGCTCACC
CGGACCGGCG GGCTGGTCGG CACACCGGGT TGGACCTCCC CGGAGCAGTA CGCGGGCGGT
GGGGCCACCG ACCGCTCCGA CATGTTCGCC TGGGGCGGGT TGACGGCCTT CGCCGCCACC
GGGCGCAACC CGTTCGGCGC GGGCGGCACC GACACCCTGG TGCCGCGCGT GCTGTCGGAG
CCGCCTGATC TGGAGGGCCT TCCCGGGGCC CTGCGCGCAC TGGTGGAACG GGCCCTGGAC
AAGGACCCCG CGCGGCGGCC GGACGCCGCC GCCGCGCTGC GGGAGACGGC CGCGCTGCTG
CGCGCCGCCC CGGGCGGGGC GGGGGCCTCC GGTGCGGTGG GTGCCTTCGG GCCGGGCGCT
CCTGCGGCCG ACGTTCCCGG GGCCGACGTT CCTCCGGCGG GCGCGCCCAC GGCCGGTGCC
GCTCCGGCGG GCGCTTCCGG GGGCTCTGCC ACCGGCCCCG GTACGGACCC CGGCGCGGAC
CTTCCCCGGC TCGTGGCCCG GGCCTGGACC GGCGCCGTCG CCCCCGACGA CGGCCGGACC
GACCTCTGGC GCTTCCACGC CCCGCCCCGG CGCTCCTGGG CGCGCCGCAA CCAGCGGCCC
CTGGCGCTCG GCGCGGCCGG ACTCGCGCTC GCCCTGCTGG CCGGAACGGG GCTGACCGCC
CTCTCCGGGG GCGGGGACGA GGGGCCCGCG GCGACCGGCG GCGGCACCTC CGCCCCGGAC
ACCGCCGACG GCGACGGCGC GGGACAGGGC GGCGCGTGGG AGGACGTGCC CGCCGAGTAC
CGGGACCTGT ACGCCACCGG GACCGCGGCC GTGGAGTCCG TCCCCGGCGA CAGCGCCCAA
CTGGTCCGCA CGCTCGAACC CGCGGAGGGG GAGGGCGAGG CACTGGACCA GCTGCGGTTG
ACCCTCACCC GCGGCGAGCG CTTCACCAAC TCGATCACCG TCACGGCCAC CGCCGAGTAC
CTCCCCGACT TCGGCGGCCT GAGCATCCAC AACGACGACT TCGCCTGGGT GAGCCAGATC
ACCCCCGAGC AGGACCACCT CGACTTCTCC CGGCCCGGCA GCCGGGGCGT GCTCGCCGAA
CTCGACCCGG ACAACCCCGT GGCCGAGTTC ACCGTGACGA TCGTCGGCGC CGTCACCTTC
GGCGTCTTCT ACTACCTGCC CGCCGAGGCC CTGGACGAGG AGCAGCGGAT CGCCCCCGGC
TACCCCGGCG GCTTCTGCCA CGTGGCACCG AACCCGGGCG ACGAGCAGTC CTACCCCGGC
TTCACCGACT CGCCGGGGCT CGCCCCGCAC GACGCCGCCC TGGTGGACGG CGTCCCCGTC
AACAGCTGCG CGTACCAGGA GTCCGACCCG TTCTCCTGA
|
|---|
| Protein sequence | MHPGSAPPPL PPGVLPLASD EPRRVGPFRV VGRIGSGGMG VVYAALDDAD RRVAVKCVHR
VYAGDGEFRE RFAREVALVR RVRAACVPGF LGADTRAEVP WLATEYVPGP TLDARVRARG
PLTGAALTAF ALGVAEALTA IHGAGVVHRD LKPGNVILSP GGPRVLDFGI ARTVDGTALT
RTGGLVGTPG WTSPEQYAGG GATDRSDMFA WGGLTAFAAT GRNPFGAGGT DTLVPRVLSE
PPDLEGLPGA LRALVERALD KDPARRPDAA AALRETAALL RAAPGGAGAS GAVGAFGPGA
PAADVPGADV PPAGAPTAGA APAGASGGSA TGPGTDPGAD LPRLVARAWT GAVAPDDGRT
DLWRFHAPPR RSWARRNQRP LALGAAGLAL ALLAGTGLTA LSGGGDEGPA ATGGGTSAPD
TADGDGAGQG GAWEDVPAEY RDLYATGTAA VESVPGDSAQ LVRTLEPAEG EGEALDQLRL
TLTRGERFTN SITVTATAEY LPDFGGLSIH NDDFAWVSQI TPEQDHLDFS RPGSRGVLAE
LDPDNPVAEF TVTIVGAVTF GVFYYLPAEA LDEEQRIAPG YPGGFCHVAP NPGDEQSYPG
FTDSPGLAPH DAALVDGVPV NSCAYQESDP FS
|
|---|
| |