| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3872 |
|---|
| Symbol | |
|---|
| ID | 9247743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 4643212 |
|---|
| End bp | 4643961 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_003681775 |
|---|
| Protein GI | 297562801 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCCGC GCGTGATCGC GGCGGTTCTG GCCGGAGGGG TGGGCGCGCG GATGGGCGCG
CCCGCGCCCA AGCAGCTGCT GCCTTTGGAG GGCCGGCCCA TCCTAGAGCA CGCCGTCGCC
GCGTTCGAGG CGTGCCCGGA CGTCGACGAG ATCGTCGTGC TCATGGTGGA GGAGTACCTC
GACCGGGTCC GGGAGATCGT CGACGCGGCC GGGTTCACCA AGGTCACCGC GGTCCTCCCC
GGCGGGGCGA CCCGCACCGG CACCTCCGTC GCCGCCCTGG CCGCGATGGG CGGCGCCGCC
GACACCGACC TGGTGCTGCT GCACGACGCG GCGCGCCCGC TCGTGAGCCC GGCGGTCATC
AGCGCGTGCG TGGCGGCGCT GGCGGAGACG GGCGCGGTCG GGGTGGCGGT GCCCAGCGCC
GACACCGTGG TGCGGGTGGC GCCCGGCGGT TCCGGCGGCG AGGTGATCAT GGAGGTCCCC
CCGCGCGCGC GGCTGCGCAG GATGCAGACC CCGCAGGGCT TCCGGCTCGG TGTGGCCCGC
CGCGCCTACG AGCTGGCCTC GGCCGACCCG GACCTGGTGG CCACCGACGA CTGCGGCGTG
GTGCTGCGGT ACCTGCCGGA GGAGGAGGTG CGGATCGTGC CCGGAGAGGA GACGAACATC
AAGGTGACGA ACCCGGGCGA CGTGGAGATC GCCGAGACGC TGCTGCGCCG CGGGCGCGAG
CGCGCCGCCC TGTCGGGGGC GGACGCGTGA
|
|---|
| Protein sequence | MRPRVIAAVL AGGVGARMGA PAPKQLLPLE GRPILEHAVA AFEACPDVDE IVVLMVEEYL
DRVREIVDAA GFTKVTAVLP GGATRTGTSV AALAAMGGAA DTDLVLLHDA ARPLVSPAVI
SACVAALAET GAVGVAVPSA DTVVRVAPGG SGGEVIMEVP PRARLRRMQT PQGFRLGVAR
RAYELASADP DLVATDDCGV VLRYLPEEEV RIVPGEETNI KVTNPGDVEI AETLLRRGRE
RAALSGADA
|
|---|
| |