Gene Ndas_3860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3860 
Symbol 
ID9247731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4632260 
End bp4633441 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content71% 
IMG OID 
Productprotein serine/threonine phosphatase 
Protein accessionYP_003681763 
Protein GI297562789 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.758933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAGAT ACGAGACCGT AGCGCGGTCC CTCCGCGAGG CCCAGCCGCA CGGGCTCATG 
GCGGTCCTCC GTGGGGCTCT CTCCGAGGAC TACGCGGCGG TGTCCGCCGA ACTCTTCCTC
GCTGACTACG GACTCAAGGT ACTCTGCCAC GTCCCCGATC CGCCCGGGGA GTGCGCGGGG
GAGTACTCCG TCTTCAACAG TGTCGTGGGC AGGGTCTTCG GCGCTCAGGA GACCTTCGTC
GAGGACAGCT TCGGCTCCGA GGCCGTCACC GTTCACCTTC CGGTGAGCGC CCGCGGCGAC
CGCCTGGGCG TGCTCACCGT CGAACTGAAG GCGGCCGACT ACTCCGCCGG GGTGCTCGCC
GAACTGGGGC AGGTCGCCAG CCTGCTGGGC CACGAGATCC TCGTCGCCGA GCGCGACACC
GACGTCTACC GGACGCTGCG CCGCAGGGAC CGCCTCACCC TGGCCGCCGA GGTCCAGTGG
GACCTGCTGC CGGGCCGGGG ATTCGAGTGC CCCGAGTACA GCATCGGCGC CCAGCTGGAG
CCGGCCTACT CCATACGCGG CGACAACTTC GACTGGTCGG CCGCGCCGGA CCGGCTCACC
CTGGGCATCA CCAACGGCAT GGGCGAGGGC ATCGACGCCT CGCTGCTGAC CAGCCTGGCG
GTCAACGCCC TGCGCAACGC CCGCCGCAGC GGGATCCCGC TGGCCGACCA GGTCGCCCTC
GCCGACAAGG CCGTCTACGC CCACTACCGG GGAGAGCGCT ACCTGGACGT CCTCCTGCTC
GGCTTCGACC TGGCCACCGG CGAGGTGCAG GCGGTCGACG CGGGCTCGCC CCTCCTCTAC
CGCCTGCGCG GCGACCGCGT CGAGCAGCTG CCCTTCGAGG CCCAGCTGCC CATGGGCATG
GCCGAGGACA CCGTCTACAC CGCGGAGCGC TTCCGGGTCG AGCCGGGCGA CCGGCTGGTG
TTCGTCAGCG ACGGCGTGTT CGACGCCAAG GGGCCGTCCG AGGAGGAGAC CTTCGGCAGC
CGGGCACTGT CCCTGGCCAT CCTGGCCACC AGGCTGGTGC CCAGCGCCTC CGTCCCCCAG
GAGGTCCTGC GCCACCTGGC CGAGTACCGC GGTGAGCACG AGTCCGTCGA CGACGCGCTG
GTGGTATGCC TGGACTGGCG GGGCCGGAGC GAGCCGGAGT AG
 
Protein sequence
MNRYETVARS LREAQPHGLM AVLRGALSED YAAVSAELFL ADYGLKVLCH VPDPPGECAG 
EYSVFNSVVG RVFGAQETFV EDSFGSEAVT VHLPVSARGD RLGVLTVELK AADYSAGVLA
ELGQVASLLG HEILVAERDT DVYRTLRRRD RLTLAAEVQW DLLPGRGFEC PEYSIGAQLE
PAYSIRGDNF DWSAAPDRLT LGITNGMGEG IDASLLTSLA VNALRNARRS GIPLADQVAL
ADKAVYAHYR GERYLDVLLL GFDLATGEVQ AVDAGSPLLY RLRGDRVEQL PFEAQLPMGM
AEDTVYTAER FRVEPGDRLV FVSDGVFDAK GPSEEETFGS RALSLAILAT RLVPSASVPQ
EVLRHLAEYR GEHESVDDAL VVCLDWRGRS EPE