Gene Ndas_3855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3855 
Symbol 
ID9247726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4627681 
End bp4629363 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content76% 
IMG OID 
Productprotein serine phosphatase with GAF(s) sensor(s) 
Protein accessionYP_003681758 
Protein GI297562784 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.574477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.471316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAC CGCTGCTCGA CCTGCGGGTC CGCGGCACGG TCGACGCGGC GCGGGCACGC 
GCGGCCATGG CACGCGTGCT CGGCGCCGCA CGAGGCGGGG ACGAGGCCGA ACTGGAGTTC
CTGGACGGCG CCTCCTCGTC GGCGCTGCGC GCGGCGGAAC CCGACGGCCC GGCCGCGCTG
GCGGTGGAGC TGTCCGAGGA CGGGCTCGTG CTGCGCGCCA CCGTCCGCGA CGGCGCGGGG
GAGAACTGTT GGGAGTCCGC CCTGCCCCTC CCCGAGCCCC TCGACCCGGA GGCCGCGGCG
GACGGCGGTC AGGAGGAGGC CGACGCCGAA CTCCTGGCGG CGGAGCTGCT GCGCACCTCC
GAGCGCGCGG GGAGGGTGGC CGCCGTCGCG GCCGAGCGCG CACGCGAGCT GGAGTGGCAC
CAGCGCGAGC TGGAGGAGAC CAACCAGGGC GTGCTCGCGC TGCACGCCGA ACTCGCCGAG
GCCAGCGACG AACAGCGCAG GCTCCTGGCG GCCGAGCGGG CGGCCCGGGA CCAGGCGGAG
GCCGCCCGCA ACAGGCTCAC GTTCCTCTCC ACGGCCAGCG CGAGGCTCAT GACCTCCCTG
AACCAGTCGG AGATCTTCGC CCGCCTCCAG GACCTGCTCG TGCCCGAGCG CGCCGACGCC
GTCGAGGCGT GGCTCACCGA CGAGGACGGC GGCCTGTGCG CCTCCGACGC GCGTGAGGCA
GCCGTGCCGG ACACGGTGCT CCTGGCCGCG GCCCGGCAAC GCCCGACGGA CGCCCTGGCC
GGGGAGGGAG AGCTGGCCCT CCCCCTGCTC ACGGGCTCGG GGCTGCTCGG GGTGCTGCTG
CTGCGCCGCA CCGACCCCCT GGACGCCGAC GACGAGGTCG TGCTGGTCGA ACTCGCGCGG
CGGGCGGCGG CTTCGCTGGA CAACGCGCGC CGCTTCGAGC GCGAGCGCGA CACGGCGGCC
ACCCTCCAGC GCGCCATGCT CACCGAGCTG CCCGAGACCC CGGGGATGGA GCTGACGGCC
CGCTACCTGC CCGCCACGCG CGGGATGAAC GTGGGCGGCG ACTGGTACGA CGTCTTCTCG
CGGGGCGACG GCGAGTTCAT CGGCGTGGTC GGCGACGTCA CCGGGCACGG CATCCACGCG
GCGGTGATGA TGGGCCAGCT GCGCACGGCC CTGCGCGCGT ACGCGCTGGA GGAGCGCAGC
CCGGCCGTGC TGCTGGAACG CCTGCACCGG CTGCTGGGCC ACCTCGAACC GGACCTGTTC
GCGACCGCGG TCATCGTGCG CTTCCGGCCG GGGGACCCCG AGGTGGTGAT GGCCGGGGCC
GGGCACCCGC CGCCGCTGTG GCGCGACGGC GAGGGCAGGG CGGAGGCGGT GCCCCTGCCG
TCCGGCGGCA TGCTCGGCCT GCCGGTGGAG CTGTCCTACA CCGACCACAC CGTCGAACTG
CCCCCGGGCG CCGCGCTGCT GCTGTACAGC GACGGCCTGA TCGAGCGGCG CGGGGAGTCC
ATCGACGACG GGATCGCGCG CCTGGTGGAG GGCTTCGGGG GACCGCCGTA CTGGCGGGGC
GGCCCGGACA AGGCGGCCGA CGACCTGCTG GACGCCATGG TCAAGTACCA GGACTGCGAC
GACGACGTGT GCCTGCTGGT CTTCCTCGCA GCCGAGCGGG ACGCCCCGCG GGCGGACGGG
TAG
 
Protein sequence
MTQPLLDLRV RGTVDAARAR AAMARVLGAA RGGDEAELEF LDGASSSALR AAEPDGPAAL 
AVELSEDGLV LRATVRDGAG ENCWESALPL PEPLDPEAAA DGGQEEADAE LLAAELLRTS
ERAGRVAAVA AERARELEWH QRELEETNQG VLALHAELAE ASDEQRRLLA AERAARDQAE
AARNRLTFLS TASARLMTSL NQSEIFARLQ DLLVPERADA VEAWLTDEDG GLCASDAREA
AVPDTVLLAA ARQRPTDALA GEGELALPLL TGSGLLGVLL LRRTDPLDAD DEVVLVELAR
RAAASLDNAR RFERERDTAA TLQRAMLTEL PETPGMELTA RYLPATRGMN VGGDWYDVFS
RGDGEFIGVV GDVTGHGIHA AVMMGQLRTA LRAYALEERS PAVLLERLHR LLGHLEPDLF
ATAVIVRFRP GDPEVVMAGA GHPPPLWRDG EGRAEAVPLP SGGMLGLPVE LSYTDHTVEL
PPGAALLLYS DGLIERRGES IDDGIARLVE GFGGPPYWRG GPDKAADDLL DAMVKYQDCD
DDVCLLVFLA AERDAPRADG