Gene Ndas_3828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3828 
Symbol 
ID9247699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4592999 
End bp4593796 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content71% 
IMG OID 
ProductConserved TM helix repeat-containing protein 
Protein accessionYP_003681731 
Protein GI297562757 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.222399 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATGG GTCAGGGCCT GTCGACGGCC TGGCAGGCGG TGGCGAGTTT CGTGCCTCTG 
CTGATCGGCT TCCTGGTGAT CCTGGTCCTG GGATGGATCA TCGCCTGGCT GGTGGGCAAG
GCGGTCGCCA AGGGTCTGCA CGGCGTCGGA CTGGACCGCG CCCTGCACCG CGGAGGTGTG
GGCGAGTACT TCGAGCGCAG CCGGTGGAGC GCCAGCGAGC TGTGCGGAAA GATCATCTAC
TACGTCGGGC TGCTGTTCGT GTTCACGCTC GCGTTCAGCG TCTTCGGACC GAACCCGATC
AGCACGCTGC TCAACGACGT CATCGCCTGG ATCCCGCGCG GCATCGTCGC GCTGGTGATC
GTGGTGGTGG CCGCGATGAT CGCCAAGGCG GTCCGCGACA TCGTCTCCGG CGCGCTGGGC
GGCCTCTCCT ACGGCCTCTT CCTGGCCAAC GCCGCGGGCG TGTTCATCCT GGCCCTCGGC
GTCATCGCGG CGCTGAACCA GATGGGCGTG GCGGTGACCG TCACCGTGCC GGTGCTGATC
GCGGTCCTGG CCACGATCGG CGGCATCCTC GTCGTCGGCG TGGGCGGCGG CATGATCGAG
CCGATGCGCT CGCGCTGGTC CCGCTGGCTG GACGTGGCCG AGCGCGAGAC CAACCGCATG
AGCGAGGAGG GCAGCTACCG GGCCGGCCGC GAGGCGGCCC TGGGCCGTCC CGCGGACGCC
GGGCGCACGG AGCCGCGCGA GGGCGCGACC TCCCAGAGCG CGCGGCGCGG CACGGGCGGC
GAGCCGCCCG CTCCGTAG
 
Protein sequence
MDMGQGLSTA WQAVASFVPL LIGFLVILVL GWIIAWLVGK AVAKGLHGVG LDRALHRGGV 
GEYFERSRWS ASELCGKIIY YVGLLFVFTL AFSVFGPNPI STLLNDVIAW IPRGIVALVI
VVVAAMIAKA VRDIVSGALG GLSYGLFLAN AAGVFILALG VIAALNQMGV AVTVTVPVLI
AVLATIGGIL VVGVGGGMIE PMRSRWSRWL DVAERETNRM SEEGSYRAGR EAALGRPADA
GRTEPREGAT SQSARRGTGG EPPAP