Gene Ndas_3780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3780 
Symbol 
ID9247649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4543269 
End bp4543955 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content72% 
IMG OID 
ProductPeptidylprolyl isomerase 
Protein accessionYP_003681684 
Protein GI297562710 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.685255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTC TGCCCCTCCC GGCGACAGCC CTCCTGGCCT GCACCGCCCT GCTCGCCGCC 
TCCGCCTGCG CCAACGGCGC CGCAGCCCCG GCCGACCAGG GCGGATCGGA GGGCGGCGGC
ACGCCGGAGG AGACCGCCTC CGAGCAGACC GGCAGCCCCG CCGAGGTGGA CGTCACCGGA
GTCGAGGGCG CCACGCTGCA CACCAGCGAG GGCGACATCG AACTGGAGCT GTTCCCCGAG
GAGGCGCCCG TCACGGTGGC CAACTTCGTG GGCCTGGCCG AGGGCGAGGG CGTGCCCAAC
CCGGCGACGG GCGAGGCCGC GTTCTACGAC GGCACCGTGT TCCACCGGGT GATCGACGAC
TTCATGATCC AGGGCGGCGA CCCGCAGGGC ACCGGCCAGG GCGGCCCGGG CTACACCTTC
GAGGACGAGT TCGACTCCGG CCGCGAGTTC TCCGAGCCGG GCGTGCTGGC CATGGCCAAC
CGCGGCCCGG ACACCAACGG CTCGCAGTTC TTCATCACCG TCGAGCCCAC CCCGCACCTG
AACGGCATGC ACACGATCTT CGGGCACGTC GCGGACGAGG CGTCCATGGA GGTGGTGAAC
GGCATCGCCA ACGTCGAGAC CGACATGAAC GACCGCCCCA CCCAGGACGT GACCATCGAG
TCCGTCACCG TGCACCGCGC GGAGTAG
 
Protein sequence
MKLLPLPATA LLACTALLAA SACANGAAAP ADQGGSEGGG TPEETASEQT GSPAEVDVTG 
VEGATLHTSE GDIELELFPE EAPVTVANFV GLAEGEGVPN PATGEAAFYD GTVFHRVIDD
FMIQGGDPQG TGQGGPGYTF EDEFDSGREF SEPGVLAMAN RGPDTNGSQF FITVEPTPHL
NGMHTIFGHV ADEASMEVVN GIANVETDMN DRPTQDVTIE SVTVHRAE