Gene Ndas_3771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3771 
Symbol 
ID9247640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4531529 
End bp4534156 
Gene Length2628 bp 
Protein Length875 aa 
Translation table11 
GC content74% 
IMG OID 
Product7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit 
Protein accessionYP_003681675 
Protein GI297562701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGTG CGAACGACCC GGCCCCCGTC CCCTCCCCGA CCCCGTCCGC CATGCGCAGG 
GCCCTGGCCC GCGCCCGGGA CGGCAAGACC CTCGACGTCA CCGAGGCAGA GGTACTCCTG
CACGCCAGGG GCGAGGACCT GGACATCCTC CTCGAACACG CCGGAAGGGT GCGCGACGCC
GGGCTGGAGG CCGCGGGCCG CCCCGGGGTC GTCACCTACA GCCGCAAGGT GTTCGTCCCC
CTGACCCGCC TGTGCCGCGA CCGCTGCCAC TACTGCACGT TCGCCACGGT GCCCGGCCGC
CTCGACGCCC CGTTCCTGTC GCCCGACGAG GTCCTGGACA TCGCCCGGCG GGGCGCCGGG
ATGGGCTGCA AGGAGGCCCT GTTCACGCTC GGCGACCGGC CCGAGGACCG CTGGAAGCAG
GCCGCCGAGT GGCTCAACGC CCACGGCTAC GACGACACCC TGTCCTACGT GCGGGCCATG
GCCATCATGG TGCTGGAGGA GACCGGCCTG CTCCCGCACC TGAACCCGGG CGTGCTCACC
TGGGCCGACC TCCAGCGCCT CAAGCCCGTC GCCCCCTCCA TGGGGATGAT GCTGGAGACC
ACCTCCACCC GGCTGTTCAC CGAGAAGGGC CAGGCCCACT ACGGCAGCCC GGACAAGGAC
CCGGCGGTAC GGCTGCGCGT GCTGGAGGAC GCCGGGCGCT CCAGCGTCCC CTTCACCACC
GGCATCCTCC TGGGCATCGG TGAGAACACC GCCGAGCGCG CCGAGTCGAT CTTCGCGATG
CGCGGCGCCT CGCGGCGCTA CGGCGGCGTC CAGGAGGTCA TCGTGCAGAA CTTCCGCGCC
AAGCCCGCGA CCGCGATGAT GCACCGGCCC GACGCCGAAC GCGAGGAGAT GGCCGCCGCC
ATCGCCGTCA CCCGCCTGGT CATGGGGCCC AGGGCGCACG TGCAGGCGCC GCCCAACCTC
ATCGGCGCCG AGCACGGGGG CGTGGACGAG TACGGGCTGA TGCTGCGCGC GGGGATCGAC
GACTGGGGCG GGGTCTCCCC GCTCACCCCC GACCACGTCA ACCCGGAGCG GCCCTGGCCG
CAGATCGACG ACCTCGCCGC GCGCACCGCC GCCCACGGCT TCGCCCTGCG CGAGCGGCTC
ACCGTCTACC CCGAGTACGT CCTGGCCGGG GAGCCCTGGC TGGACCCGCG CGTGGCCGGG
CACGTGGCCG CCCTCGCCGA CCCCGAGACC GGCCTGGCCC GCGAGGACGC GCCCGTGGTG
GGCCGCCCCT GGCAGGAGCC CGAGGCGGTG CTGGTCTCCT CCGGCCGCAC CGACCTGCAC
ACGGGGATCG ACGCCGAGGG GCGCACCGCC GACCGCCGCG GCGACTTCGA CGCCGTCTAC
GGGGACTGGG ACGAGCTGCG CTCCGGCGTG GACCGCGAGG GGGCCGTGCC GCGCAGGTTC
GACCCCGACA TCGCGGCGGC CCTGCGCAGC GCCGAGTCCG ACCCCGCGGG GCTGTCCGAC
GACGCGGCGC TCGCCCTGCT GCACGCCGAC GGGGCCGAGC TGGAGGCGCT GACCGACCTG
GCCGACCGGG TGCGCCGGGA CGCGGTCGGC GACGACGTCA CCTACGTCGT GACCAGGAAC
ATCAACTTCA CCAACGTCTG CTACACCGGC TGCCGCTTCT GCGCGTTCGC CCAGCGCCGC
ACCGACGCCG ACGCCTACAC GCTCTCCCTG GAGCAGGTCG CCGACCGCGC CGAGGAGGCC
TGGAAGGCCG GGGCGACCGA GGTGTGCATG CAGGGCGGCA TCCACCCGGA CCTGCCCGGC
ACCGCCTACT TCGACATCGC CGCCGCCGTG CGCGAGCGCG TCCCGGACAT GCACGTCCAC
GCGTTCAGCC CGATGGAGGT GGTCAACGGG GCGGCGCGCA CCAACCTGCC GGTCCGCGAG
TGGCTGCTGC GCGCCCGCGA GGCCGGGCTC GGCTCCGTGC CGGGCACCGC CGCCGAGATC
CTCGACGACG AGGTCCGCTG GATCCTCACC AAGGGCAAGC TGCCCGCGGC CGAGTGGATC
GACGTCATCA CGTCCGCGCA CGACCTGGGC ATCCCCACCA CGTCCACGAT GATGTACGGG
CACGTGGACT CGCCCAGGCA CTGGGTGGCG CACATCAAGC TGCTGCGCTC CCTCCAGGAG
CGGTCGGTGG AGCGCAACGG CCGCCGGGGG TTCACCGAGT TCGTCCTGCT GCCGTTCGTG
CACACCAACG CGCCCATCTA CCTGGCCGGG CTGGCCCGCA CCGGGCCGAC GGTCCGGGAG
AACCGCGCCG TGCACGCCCT GGCCCGCCTG CTGCTGCACG GGCACATCGA CAACATCCAG
TGCTCGTGGG TCAAGCTCGC CGAGGACACC TGCCGCCAGC TGCTCTCGGG CGGGGTGAAC
GACGTCGGCG GCACCCTGAT GGAGGAGACC ATCAGCCGGA TGGCCGGGTC GGGCCAGGGG
TCGTTCAAGA CCATCAGCGA CATCCGCGCC CTGGTCGAGC CGACGGGCCG CCCCGTCCGC
CAGCGCACCA CGACCTACGG TCCGGTGCCG CAGGAGCGCC AGCGCGCGGC CGAGGCCAGC
GACGGCGTGG CCCCCAGCGT CCGGCGCCCC TCGCTGCCGC TGGTCTAG
 
Protein sequence
MSGANDPAPV PSPTPSAMRR ALARARDGKT LDVTEAEVLL HARGEDLDIL LEHAGRVRDA 
GLEAAGRPGV VTYSRKVFVP LTRLCRDRCH YCTFATVPGR LDAPFLSPDE VLDIARRGAG
MGCKEALFTL GDRPEDRWKQ AAEWLNAHGY DDTLSYVRAM AIMVLEETGL LPHLNPGVLT
WADLQRLKPV APSMGMMLET TSTRLFTEKG QAHYGSPDKD PAVRLRVLED AGRSSVPFTT
GILLGIGENT AERAESIFAM RGASRRYGGV QEVIVQNFRA KPATAMMHRP DAEREEMAAA
IAVTRLVMGP RAHVQAPPNL IGAEHGGVDE YGLMLRAGID DWGGVSPLTP DHVNPERPWP
QIDDLAARTA AHGFALRERL TVYPEYVLAG EPWLDPRVAG HVAALADPET GLAREDAPVV
GRPWQEPEAV LVSSGRTDLH TGIDAEGRTA DRRGDFDAVY GDWDELRSGV DREGAVPRRF
DPDIAAALRS AESDPAGLSD DAALALLHAD GAELEALTDL ADRVRRDAVG DDVTYVVTRN
INFTNVCYTG CRFCAFAQRR TDADAYTLSL EQVADRAEEA WKAGATEVCM QGGIHPDLPG
TAYFDIAAAV RERVPDMHVH AFSPMEVVNG AARTNLPVRE WLLRAREAGL GSVPGTAAEI
LDDEVRWILT KGKLPAAEWI DVITSAHDLG IPTTSTMMYG HVDSPRHWVA HIKLLRSLQE
RSVERNGRRG FTEFVLLPFV HTNAPIYLAG LARTGPTVRE NRAVHALARL LLHGHIDNIQ
CSWVKLAEDT CRQLLSGGVN DVGGTLMEET ISRMAGSGQG SFKTISDIRA LVEPTGRPVR
QRTTTYGPVP QERQRAAEAS DGVAPSVRRP SLPLV