Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3771 |
Symbol | |
ID | 9247640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 4531529 |
End bp | 4534156 |
Gene Length | 2628 bp |
Protein Length | 875 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
Protein accession | YP_003681675 |
Protein GI | 297562701 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGTG CGAACGACCC GGCCCCCGTC CCCTCCCCGA CCCCGTCCGC CATGCGCAGG GCCCTGGCCC GCGCCCGGGA CGGCAAGACC CTCGACGTCA CCGAGGCAGA GGTACTCCTG CACGCCAGGG GCGAGGACCT GGACATCCTC CTCGAACACG CCGGAAGGGT GCGCGACGCC GGGCTGGAGG CCGCGGGCCG CCCCGGGGTC GTCACCTACA GCCGCAAGGT GTTCGTCCCC CTGACCCGCC TGTGCCGCGA CCGCTGCCAC TACTGCACGT TCGCCACGGT GCCCGGCCGC CTCGACGCCC CGTTCCTGTC GCCCGACGAG GTCCTGGACA TCGCCCGGCG GGGCGCCGGG ATGGGCTGCA AGGAGGCCCT GTTCACGCTC GGCGACCGGC CCGAGGACCG CTGGAAGCAG GCCGCCGAGT GGCTCAACGC CCACGGCTAC GACGACACCC TGTCCTACGT GCGGGCCATG GCCATCATGG TGCTGGAGGA GACCGGCCTG CTCCCGCACC TGAACCCGGG CGTGCTCACC TGGGCCGACC TCCAGCGCCT CAAGCCCGTC GCCCCCTCCA TGGGGATGAT GCTGGAGACC ACCTCCACCC GGCTGTTCAC CGAGAAGGGC CAGGCCCACT ACGGCAGCCC GGACAAGGAC CCGGCGGTAC GGCTGCGCGT GCTGGAGGAC GCCGGGCGCT CCAGCGTCCC CTTCACCACC GGCATCCTCC TGGGCATCGG TGAGAACACC GCCGAGCGCG CCGAGTCGAT CTTCGCGATG CGCGGCGCCT CGCGGCGCTA CGGCGGCGTC CAGGAGGTCA TCGTGCAGAA CTTCCGCGCC AAGCCCGCGA CCGCGATGAT GCACCGGCCC GACGCCGAAC GCGAGGAGAT GGCCGCCGCC ATCGCCGTCA CCCGCCTGGT CATGGGGCCC AGGGCGCACG TGCAGGCGCC GCCCAACCTC ATCGGCGCCG AGCACGGGGG CGTGGACGAG TACGGGCTGA TGCTGCGCGC GGGGATCGAC GACTGGGGCG GGGTCTCCCC GCTCACCCCC GACCACGTCA ACCCGGAGCG GCCCTGGCCG CAGATCGACG ACCTCGCCGC GCGCACCGCC GCCCACGGCT TCGCCCTGCG CGAGCGGCTC ACCGTCTACC CCGAGTACGT CCTGGCCGGG GAGCCCTGGC TGGACCCGCG CGTGGCCGGG CACGTGGCCG CCCTCGCCGA CCCCGAGACC GGCCTGGCCC GCGAGGACGC GCCCGTGGTG GGCCGCCCCT GGCAGGAGCC CGAGGCGGTG CTGGTCTCCT CCGGCCGCAC CGACCTGCAC ACGGGGATCG ACGCCGAGGG GCGCACCGCC GACCGCCGCG GCGACTTCGA CGCCGTCTAC GGGGACTGGG ACGAGCTGCG CTCCGGCGTG GACCGCGAGG GGGCCGTGCC GCGCAGGTTC GACCCCGACA TCGCGGCGGC CCTGCGCAGC GCCGAGTCCG ACCCCGCGGG GCTGTCCGAC GACGCGGCGC TCGCCCTGCT GCACGCCGAC GGGGCCGAGC TGGAGGCGCT GACCGACCTG GCCGACCGGG TGCGCCGGGA CGCGGTCGGC GACGACGTCA CCTACGTCGT GACCAGGAAC ATCAACTTCA CCAACGTCTG CTACACCGGC TGCCGCTTCT GCGCGTTCGC CCAGCGCCGC ACCGACGCCG ACGCCTACAC GCTCTCCCTG GAGCAGGTCG CCGACCGCGC CGAGGAGGCC TGGAAGGCCG GGGCGACCGA GGTGTGCATG CAGGGCGGCA TCCACCCGGA CCTGCCCGGC ACCGCCTACT TCGACATCGC CGCCGCCGTG CGCGAGCGCG TCCCGGACAT GCACGTCCAC GCGTTCAGCC CGATGGAGGT GGTCAACGGG GCGGCGCGCA CCAACCTGCC GGTCCGCGAG TGGCTGCTGC GCGCCCGCGA GGCCGGGCTC GGCTCCGTGC CGGGCACCGC CGCCGAGATC CTCGACGACG AGGTCCGCTG GATCCTCACC AAGGGCAAGC TGCCCGCGGC CGAGTGGATC GACGTCATCA CGTCCGCGCA CGACCTGGGC ATCCCCACCA CGTCCACGAT GATGTACGGG CACGTGGACT CGCCCAGGCA CTGGGTGGCG CACATCAAGC TGCTGCGCTC CCTCCAGGAG CGGTCGGTGG AGCGCAACGG CCGCCGGGGG TTCACCGAGT TCGTCCTGCT GCCGTTCGTG CACACCAACG CGCCCATCTA CCTGGCCGGG CTGGCCCGCA CCGGGCCGAC GGTCCGGGAG AACCGCGCCG TGCACGCCCT GGCCCGCCTG CTGCTGCACG GGCACATCGA CAACATCCAG TGCTCGTGGG TCAAGCTCGC CGAGGACACC TGCCGCCAGC TGCTCTCGGG CGGGGTGAAC GACGTCGGCG GCACCCTGAT GGAGGAGACC ATCAGCCGGA TGGCCGGGTC GGGCCAGGGG TCGTTCAAGA CCATCAGCGA CATCCGCGCC CTGGTCGAGC CGACGGGCCG CCCCGTCCGC CAGCGCACCA CGACCTACGG TCCGGTGCCG CAGGAGCGCC AGCGCGCGGC CGAGGCCAGC GACGGCGTGG CCCCCAGCGT CCGGCGCCCC TCGCTGCCGC TGGTCTAG
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Protein sequence | MSGANDPAPV PSPTPSAMRR ALARARDGKT LDVTEAEVLL HARGEDLDIL LEHAGRVRDA GLEAAGRPGV VTYSRKVFVP LTRLCRDRCH YCTFATVPGR LDAPFLSPDE VLDIARRGAG MGCKEALFTL GDRPEDRWKQ AAEWLNAHGY DDTLSYVRAM AIMVLEETGL LPHLNPGVLT WADLQRLKPV APSMGMMLET TSTRLFTEKG QAHYGSPDKD PAVRLRVLED AGRSSVPFTT GILLGIGENT AERAESIFAM RGASRRYGGV QEVIVQNFRA KPATAMMHRP DAEREEMAAA IAVTRLVMGP RAHVQAPPNL IGAEHGGVDE YGLMLRAGID DWGGVSPLTP DHVNPERPWP QIDDLAARTA AHGFALRERL TVYPEYVLAG EPWLDPRVAG HVAALADPET GLAREDAPVV GRPWQEPEAV LVSSGRTDLH TGIDAEGRTA DRRGDFDAVY GDWDELRSGV DREGAVPRRF DPDIAAALRS AESDPAGLSD DAALALLHAD GAELEALTDL ADRVRRDAVG DDVTYVVTRN INFTNVCYTG CRFCAFAQRR TDADAYTLSL EQVADRAEEA WKAGATEVCM QGGIHPDLPG TAYFDIAAAV RERVPDMHVH AFSPMEVVNG AARTNLPVRE WLLRAREAGL GSVPGTAAEI LDDEVRWILT KGKLPAAEWI DVITSAHDLG IPTTSTMMYG HVDSPRHWVA HIKLLRSLQE RSVERNGRRG FTEFVLLPFV HTNAPIYLAG LARTGPTVRE NRAVHALARL LLHGHIDNIQ CSWVKLAEDT CRQLLSGGVN DVGGTLMEET ISRMAGSGQG SFKTISDIRA LVEPTGRPVR QRTTTYGPVP QERQRAAEAS DGVAPSVRRP SLPLV
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