| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3745 |
|---|
| Symbol | |
|---|
| ID | 9247614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 4497585 |
|---|
| End bp | 4498262 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_003681649 |
|---|
| Protein GI | 297562675 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.5489 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGAC GTGTACTGGT TGTCGACGAC GACCTCGCCC TCGCTGAGAT GCTGGGCATC
GTTCTGCGTG GAGAGGGGTT CGAGCCCTCG TTCGTGCACG ACGGGGACAA GGCCCTGGAG
GCCTTCCGCG AGACCAAACC CGACCTGGTC CTCCTCGACC TGATGCTCCC CGGCGCCGAC
GGGATCGACG TCTGCCGTCA GATCCGCGCC GAGTCCGGCG TGCCCATCGT GATGCTCACC
GCCAAGAGCG ACACCATCGA CATCGTCCTC GGGCTGGAGT CGGGCGCCGA CGACTACATC
GTCAAGCCCT TCAAGCCCAA GGAGCTCGTG GCCCGCGTCC GGGTGCGCCT GCGCCGCACC
GAGGAGCCCG CGCCCGAGGT GCTCCAGATC GGGGACATCA CCATCGACGT CGCCGGGCAC
GCCGTGCGCC GCGACGGCGA GCAGATCAGT CTCACCCCGC TGGAGTTCGA CCTCCTGGTG
GCCCTGGCCC GCAAGCCGCG CCAGGTCTTC ACCCGCGAGG TGCTGCTGGA GCAGGTCTGG
GGCTACCGGC ACGCCGCCGA CACCCGCCTG GTCAACGTCC ACGTGCAGCG CCTGCGCGCC
AAGATCGAGA AGGACCCGGA GCACCCCGAG GTCGTCGTGA CCGTCCGCGG CGTCGGCTAC
AAGGCCGGAA CCGCCTGA
|
|---|
| Protein sequence | MKGRVLVVDD DLALAEMLGI VLRGEGFEPS FVHDGDKALE AFRETKPDLV LLDLMLPGAD
GIDVCRQIRA ESGVPIVMLT AKSDTIDIVL GLESGADDYI VKPFKPKELV ARVRVRLRRT
EEPAPEVLQI GDITIDVAGH AVRRDGEQIS LTPLEFDLLV ALARKPRQVF TREVLLEQVW
GYRHAADTRL VNVHVQRLRA KIEKDPEHPE VVVTVRGVGY KAGTA
|
|---|
| |