Gene Ndas_3650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3650 
Symbol 
ID9247519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4379583 
End bp4380335 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content72% 
IMG OID 
ProductMIP family channel protein 
Protein accessionYP_003681555 
Protein GI297562581 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.348942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.828638 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTATC TGGCAGAGTT CGTCGGTACG GCGATCCTGA TCCTGCTCGG CGGCGGTGTC 
GTCGCCGGTG TCTCGCTCGC GCGCTCCAAG GCCCTCAACG GCGGCTGGAT CGTCGTCACC
TTCGGCTGGG GCATGGCGGT CGCGATGGCC GTCTACGTCG TCGGCGCCAC CAGCGGCGCA
CACATCAACC CCGCCGTCAC GCTGGGCCTG GCCAGCATCG GCGACTTCCC GTGGTCCCAG
GTGCCCGGGT ACATGCTGGC CCAGCTGGCG GGCGCGTTCA CCGGCGCCGT CCTGGTCTAC
CTGGTCTACC TGCCGCACTG GAAGGTCACC GACGACCCGG AGGCGAAGCT GGGCGTGTTC
AGCACCGCCC CGGCCGTGCG CAACCTGGTG GCCAACTTCG TCACCGAGGT CATCGGCACC
GCGATGCTGC TCCTGGGCGT GCTGGGCATC GGCGCGAACT CCGGCTTCGT CTCCGTCGAG
GGCGGGGCCG ACCTGAGCGG CCTGTTCACC AACGGCCTCG CGCCGCTGCT GATCGGCCTG
CTGGTGCTGG CGATCGGCCT GTCCCTGGGC GGCCCGACGG GGTACGCCAT CAACCCGGCC
CGCGACCTGG GGCCGCGCAT CGCGCACGCG GTGCTGCCGA TCCCGGGCAA GGGCCCCTCC
GACTGGGGGT ACGCCTGGGT TCCGGTGGTC GGCCCCCTGG TGGGCGGCGT GATCGGCGCG
TGGATCTGGA AGCTCACCGG GTTCGGCGCC TGA
 
Protein sequence
MVYLAEFVGT AILILLGGGV VAGVSLARSK ALNGGWIVVT FGWGMAVAMA VYVVGATSGA 
HINPAVTLGL ASIGDFPWSQ VPGYMLAQLA GAFTGAVLVY LVYLPHWKVT DDPEAKLGVF
STAPAVRNLV ANFVTEVIGT AMLLLGVLGI GANSGFVSVE GGADLSGLFT NGLAPLLIGL
LVLAIGLSLG GPTGYAINPA RDLGPRIAHA VLPIPGKGPS DWGYAWVPVV GPLVGGVIGA
WIWKLTGFGA