| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3576 |
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| Symbol | |
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| ID | 9247445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | + |
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| Start bp | 4288522 |
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| End bp | 4290225 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_003681483 |
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| Protein GI | 297562509 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.440158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTGG GCCGGTGCCC GCACCGGTCC GTCATCCCCC GACCAGGGAA AGCGACCCTC
CGGGGCTGGG AAGGAGCCAG CATCTCATCC CTACGCGAGT ACATCCGAGA ACACACCAAC
CCCACGGTCT TCGGGGTTTC CGGGGTCGTG ATCCTCGCCT TCGTCATCGT CGGCATCGTG
GCCACCGAGC CGATGCTCGA CGCGGCCACC GCCACGCGCG ACTGGATAGG TGAGAAGCTG
GGCTGGGTCT ACGTCCTGTC CACCACCTTC TTCCTGGTGA TGGCGGTCTT CCTCATGCTG
AGCCGGTTCG GGAAGATCCG GCTGGGCCCG GCCGACTCCA GGCCCGAGTT CGGGACGCTG
GCCTGGTTCG CCATGCTGTT CACCACCGGC ATGGGCATCG GCCTGGTGTT CTGGGGGGTG
TCGGAACCCA TCCACCACCT CACCTCGCCG CGCTCGGCCG AGTTCGTCAC CCCCGAGGGT
GAACCGCCCC CGCCCGAGGC GGCGAGCGAG GCGCTGGCCC TGAGCTACTT CCACTGGAGC
TTCCACCCCT GGGCCATCTA CATCGCGCTC GGCCTGTCGC TGGGCTACTT CGCCTTCCGC
AAGGGCCTGC CCCTGCGCCC GGCCTCCGCG CTCTACCCCC TCCTGGGCGA CCGGGCTTTC
GGCTGGCCCG GGAACGTCGT GGACATCCTC GCCATCTTCG GCACGATCTT CGGCCTGGCC
ACCTCGCTGG GCCTGGGCAC CCTCCAGATC AACGGCGGGC TCAACCACGT CTTCGGCATC
CCCTCCAACG CCACCGTGCA GTCGGTCATC ATCATCCTCA TCACCGCGGT CGCGCTGGCC
AGCGTGCTCT CCGGCATCGA CAAGGGCATC CGCCGCCTGT CGATGATCAA CCTGTGGCTG
GCCTTCCTGC TGCTGGTGGT CGTCTTCGCC CTGGGCCCCA AGCTGTGGAT CGCCAGCATC
ATGACCACCG GCACGGGCGA GTACCTGAGC AACATCGTCG AGTGGAGCCT GGCCTTCCCG
AGCCCGCTCA TCGACGAGAC GGCGGCGGCC TGGACCACCG CGTGGCCCAT CTTCTACTGG
GGCTGGTGGA TCTCCTGGGC CCCGTTCGTG GGCATCTTCC TGGCCCGTAT CTCCTACGGC
CGCACCATCC GCGAGTTCGT CATCGGGGCG CTGTTCGCCC CCGTCGCCGT GTCCATCCTG
TGGTTCGGGG TGTTCGGCGG CTCCGGCCTG TACTACGAAC TGTTCGGGAA CGCCGGACTG
AGCGCGCTGA GCGAGGAGGA CCGGTCCTTC CGCCTCGTGG AGCTGCTGCC CGGAGGGCCG
CTCATCGGCG GCATCATCTC CGTCCTGCTG ATCATCGTGG TGGCGGTCTT CTTCATCACC
TCCTCCGACT CCGGCTCGCT GGTGGTGGAC ACGCTCGCCA GCGGCGGGAG CCTCAAGCCG
GTCAAGGCCC AGCGCGCCTT CTGGGCGATC AGCGAGGGCG CGGTCACCCT GATCCTGCTG
GTGCTGGGCG GGGAGAACGC CCTGTCGGCG CTCCAGGCCG CGTCGGTGGT CACCGGACTG
CCCTTCGCGA TCATCCTGCT GCTCATGGTG TGGGGCCTGA TCAAGGGGCT GTCGGAGGAG
CCCAGGCCCG GAGGCCCCCG GGAGCAGCGC GCCGAGGACC GCCCCCGGTC CGGCCGGTCC
CCGGAGAAGC AGGCGAGCGA CTAG
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| Protein sequence | MSVGRCPHRS VIPRPGKATL RGWEGASISS LREYIREHTN PTVFGVSGVV ILAFVIVGIV
ATEPMLDAAT ATRDWIGEKL GWVYVLSTTF FLVMAVFLML SRFGKIRLGP ADSRPEFGTL
AWFAMLFTTG MGIGLVFWGV SEPIHHLTSP RSAEFVTPEG EPPPPEAASE ALALSYFHWS
FHPWAIYIAL GLSLGYFAFR KGLPLRPASA LYPLLGDRAF GWPGNVVDIL AIFGTIFGLA
TSLGLGTLQI NGGLNHVFGI PSNATVQSVI IILITAVALA SVLSGIDKGI RRLSMINLWL
AFLLLVVVFA LGPKLWIASI MTTGTGEYLS NIVEWSLAFP SPLIDETAAA WTTAWPIFYW
GWWISWAPFV GIFLARISYG RTIREFVIGA LFAPVAVSIL WFGVFGGSGL YYELFGNAGL
SALSEEDRSF RLVELLPGGP LIGGIISVLL IIVVAVFFIT SSDSGSLVVD TLASGGSLKP
VKAQRAFWAI SEGAVTLILL VLGGENALSA LQAASVVTGL PFAIILLLMV WGLIKGLSEE
PRPGGPREQR AEDRPRSGRS PEKQASD
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