Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3472 |
Symbol | |
ID | 9247341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 4162000 |
End bp | 4162524 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | transcriptional regulator, PadR-like family |
Protein accession | YP_003681379 |
Protein GI | 297562405 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.287641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATCG GCAACACGCT GCTCGGTCTG CTCGAATCGG GCCCCCGCCA CGGGTACGAC CTCAAACGCC TCTTCGACGA ACGGTTCGGA CACGACCGGC CGCTGCACTA CGGACAGGTC TACTCGACGA TGTCGCGCCT GCTCAGGGAC GGCCTGGTCG AGGTGGACGG GGTGGAGACG GGCAGCGGCC CCGAGCGCAA GCGCTACGCC ATCACCGACG CCGGTGTCAC CGACGTCGGC CGCTGGCTCT CCACGCCGGA GAGCCCCGAG CCCTACCTCC AGAGCACCCT GTACGCCAAG GTCGTGCTGG CTCTGCTGAC CGGCCGTGAC GCCGCCGGGC TGCTGGACGT CCAGCGGACC GAGCACCTGC GCCTGATGCG TGAGCTCACC CGCCGCAAGA GGGGCGGCGA CCTCGCGGAC CAGCTCGTCT GCGACCACGC CCTGTTCCAC CTGGAGGCCG ACATCCGGTG GCTGGAGCTG ACCGCCGGCC GCCTGGACCG GCTCGCCGGG CAGGTCCGCG CATGA
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Protein sequence | MSIGNTLLGL LESGPRHGYD LKRLFDERFG HDRPLHYGQV YSTMSRLLRD GLVEVDGVET GSGPERKRYA ITDAGVTDVG RWLSTPESPE PYLQSTLYAK VVLALLTGRD AAGLLDVQRT EHLRLMRELT RRKRGGDLAD QLVCDHALFH LEADIRWLEL TAGRLDRLAG QVRA
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