Gene Ndas_3354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3354 
Symbol 
ID9247218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4008224 
End bp4009123 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content67% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003681266 
Protein GI297562292 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGA CCCAGAGAGT CCGCGTGAGC AGGGGCCTGG GTGAGCGTGC GATGGGGCGG 
ATCTTCCTCG CCCCGTCGTT CGCCTTCATG GCCGTGATCG CGCTCTTCCC GGTCTTCTAC
GCGATCGGGA TGAGCCTCTA CGAGATCCGG GGGTTCCGCC AGGAGTTCAC CGGCGTCGAC
AACTACGTCC GCGTCCTGAC CGACTCCGGC TTCTTCAACG CCGTCTGGAA CACCCTGGTG
TTCACGGTCG CGTCGGTGTC GCTGGAGTTC CTCGTCGGGA TGGCCTTCGC GCTGATCATG
CACCAGGCCT TCCTCGGCCG GGGCCTGACC CGCGCGGTCA TCCTGATCCC GTGGGTCATC
CCGACCGCCG TGGCCGCGCA GGTGTGGCGG TTCATGTTCG ACCCCAACCC GGGCTTCGTG
AACGCCGTCC TCGGCACGGA CATCAACTGG CTGCGCGACC CGTTCTGGTC GATGGTCGGC
ATCATCAGCG CCGACGTGTG GAAGACCGCG CCGTTCGTGG CCCTGCTGCT GCTCGCGGGC
CTCCAGACCA TCCCGAAGGA CTACTACGAG GCGGCCAGGG TGGACGGGGC CAACGCGCTC
CAGCGCTTCT GGAACATCAC CCTGCCGCTG CTGCGCCCGT CGATCGTCGT GGCCCTGCTG
TTCCGCACGG TGGACGCCCT GCGCATGTTC GACTTCGCGT ACGTGTTCAC CGGCTACTCG
AACTCGCTGG CCACCCTGTC GGTCTACGCG CAGCGCTACC TGGTCCGGGA CCCGGACCTG
GGCTACGCCA ACGCGTTGTC CACGGTCACG TTCGTCATCG TCATGCTCGT CGGCCTGGCC
TTCATCAGCC GGATGGGCCG CCACATGATC GGTGAGGCGC CGCGGAAGGA GAAGCGATGA
 
Protein sequence
MATTQRVRVS RGLGERAMGR IFLAPSFAFM AVIALFPVFY AIGMSLYEIR GFRQEFTGVD 
NYVRVLTDSG FFNAVWNTLV FTVASVSLEF LVGMAFALIM HQAFLGRGLT RAVILIPWVI
PTAVAAQVWR FMFDPNPGFV NAVLGTDINW LRDPFWSMVG IISADVWKTA PFVALLLLAG
LQTIPKDYYE AARVDGANAL QRFWNITLPL LRPSIVVALL FRTVDALRMF DFAYVFTGYS
NSLATLSVYA QRYLVRDPDL GYANALSTVT FVIVMLVGLA FISRMGRHMI GEAPRKEKR