Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3326 |
Symbol | |
ID | 9247188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3972362 |
End bp | 3977701 |
Gene Length | 5340 bp |
Protein Length | 1779 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
Protein accession | YP_003681238 |
Protein GI | 297562264 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGAGA CCACCAGCGG TCCGGCCGGA CGCAAGGGCA AGGGCAGCCG CAAGGGGATC AGGGTGAGGC GCGTCTTCAC CACCCCGGGC ACGCACCCCT ACGACTCCCT GGAGTGGGAG CGCCGCGACG TCGTCATGAC CAACTGGCGC GACGGCACGG TCAACTTCGA GCAGCGCGGG GTGGAGTTCC CCTCCTCCTG GTCGATGAAC GCCACCCAGA TCGTGACGAG CAAGTACTTC CGCGGCGCGG TGGGCACCCC CGAACGCGAG TGGAGCCTCA AACAGCTCAT CGACCGCGTC GTCGGCGTCT ACACCGAGAC CGGCCGCGAA CACGGCTACT TCGCCTCCGC CGAGGACGCC GAGGTCTTCG ACCACGAGCT CAAGCACGCC CTCGCCCACC AGCTGTTCAG CTTCAACTCC CCGGTGTGGT TCAACGTCGG CACGAACTCA AAAGCCCAGG TCAGCGCGTG TTTTATCCTG TCCGTGGACG ACACCATGGA GTCGATCCTG GACTGGTACA AGGAGGAGGG GATCATCTTC AAGGGCGGGT CCGGCGCGGG TGTGAACCTG TCGCGCATCC GCTCCAGCAA GGAACTGCTC TCCTCCGGCG GGACCGCGTC AGGCCCCGTC TCCTTCATGC GCGGCGCCGA CGCCTCGGCC GGGACCATCA AGTCCGGCGG CGCCACCCGC CGGGCCGCAA AGATGGTCGT CCTGGACGTC GACCACCCCG ACATCGAGGA CTTCGTCGAG ACCAAGGCCC GCGAGGAGCA CAAGATCCGT GCCCTGCGCG ACGCCGGGTT CGACGTCGAC CTCGGCGGTG ACGACATGTT CAGCGTCCAG TACCAGAACG CCAACAACTC CGTGCGGGTC TCCGACGCGT TCATGCGCGC CGTGGAGAGC GGCTCCGACT TCGGCCTGAC CTCCCGCACC ACCGGCGAGG TCGTCGCCAC GGTGGACGCC AAGGAGCTGT TCCAGCGCAT GGCCAGGGCC GCCTGGGAGT GCGCGGATCC GGGCATCCAG TACGACGGCA CGATCCAGGA CTGGCACACC ACGCCCGAGA GCGGACGCAT CAGTGCGAGC AACCCGTGTT TTCCGGCTGA TCAGCGCGTG CTGACGGATC GCGGACATAT ACCGATCGGT GATCTGATCA AGCGCGCGGC CCGAGGCGAG ACCTTCGCCG TGTACACCAA CGACATCACC GCTGAGACGG ACGCCCAGAA CGCTGTGGTG GCGACGATCC CCACTCAGTA CATGGTCACG GGGACCAATG AGATCCTCGA ACTGCGTTTC TCTGACGGCT CTCTCCTGCG CTGCACCCCC AACCACCGTC TGTGGACCGA GAACCGCGGC TGGGTGCACG CTGAGAAGCT GCTCTCCGAT GACCGAGTCG TCCGTTCCTT CCAGTACGCG CCTCGTTCGA ACCCGGCGCT GCGGATTCCC CGTGCGGCGC TGGAAGCCGT ACGGACGGTG GCGGCCTTGC CGAGTGTCCG TCCTCTGTAC CTGCCGGAGA AGTGGGACGA GGATCCCGAC CTCGCGCACT ACCTCGGCTG GCTCGTGGGG GACGGCTCGG TCGGTGATCA GGCGGTGGTG ACCGTCTACG GTACGGCTGA GGAGCAGCAG AACGTCCTTC CTCGGCACCA GGCGCTCATC GAGCGTCTCA CCGGGCACCG GAGCAAGCCG AGCCTCCAGC CGAACGGGAC CCAGCAGCTC AGAATCACGC GTCGCACGAT GGTCGAGTTC GTCCGAGCCC TGGGCCTGGG CGCCCGCGCG GAGGACAAGT CAGTGCCGCC GTCGCTCTTC GAGGCACCCG AGGAGACCGT GCTGGAGTTC CTCCAAGGGC TGTTCGACGC AGACGGGTGC GCGGTGGACC AGAAGGCCAA CGGAACGCGC TACATCGGTC TGGGCAGCCG TTCGGACCAG CTCCTGCGCG ATGTCCAGGA ACTCCTCGCC CCGTTTGGCA TTGCCAGCCG TGTCTACAGG ACATCCGAGG GCAAGCCGGA TTCGTTCTCC TACACTCGCA AGGATGGGTC CACGGTCACC TATGGCAGTG ACGGTCCGTT CTTCGACCTG CGGATCTCGG CCCAGTCCAT GCAGGAGTTC TCCGCCCTCG TCAACTTCTC CCTGGAGGGA AAGAGCGAGA AGCTCCGAGA GGCGCTGGAC TTCCGCCGTA TGTACAGGAC GAGGACGACT ACACGCCTGT TCTCCAGACG TTCCGCGGGA TTCGAGACCA CATACAACCT CACCGAGCCG CGCAACCACT CCTACATCGT GGGCGGCACC GTCGTCGCCA ACTGCTCGGA GTACATGTCC CTGGACGACT CGTCCTGCAA CCTGGCCTCG ATCAACCTGC TGAAGTTCCT GCGCGAGGAC GACACCTTCG ACGTGGAGCG CTTCACCGCG CTCACCGAGC TGGTCATCAC GGCGATGGAC GTCTCCATCA CCTTCGCCGA CTTCCCCACG GAGAAGATCG GCGAGACCAC CCGCGCCTAC CGGCAGCTCG GCATCGGCTA CGCCAACCTG GGCGCCCTGC TCATGGCGAC CGGCCACGCC TACGACTCCG AGGGCGGGCG CGCCGTCGCC GCCGCGGTGA CCTCGCTGAT GACCGGCACC GCCTACCGGC GCAGCGCCGA GCTGGCCGGG GTGGTCGGCC CCTACGACGG CTACCGGCGC AACGAGCGGG CCCACAAGAG GGTCATGCGC AAGCACGCCG CCGCCAACGA CGACCTGCGC ACCGTCGGAA CCCTGGAGGA GCCGATCCAC GCCGCGGCCA CCCGCGAGTG GGCCGAGTGC CTCAGGATCG GCGAGCGCAA CGGCTGGCGC AACGCCCAGG CGAGCCTTCT CGCGCCCACC GGCTGCCTCA CCGGCGACTC CATGGTCACC ACCGACCGGG GACTCGTCCG GCTCACCGAA CTGGGCGACG CCTACGGGCC CAGGTGGCAG GACCTCTCCG CCCGGGTCTC CACGGACGAG GGGCCCCGCG AGGCGACGAG GTTCTTCGTC AACGGAGAGG AGCCGACCCG GCGTATCGTG ACCAGGGGCG GGTACCGGCT CCAGGGCACG CACACCCACC GGATCAAGGT GGTCTCCCCC CGGACCGGTG ACTGGGAGTG GAAGCGCTTC GCCGACATCG CCGAGGGCGA CGTCGTTCCG GTCCAGCTGG GCACCCTGGT CGGGCAGCCC CGCCGTGTGG TGCTGCCGGT CCTGGACCAG GCCTACTACA CGGGAGATCA CGACCTGTTC GTGCCCGAGG CGGTGGACGA GGAACTCGCG GAGCTCGTCG GTTACTTCAT GGGCGACGGC AGCCTGCACG CCAAGGGCAT CCGCATGTGC GTCGCCGACA CCGACGAGGA TGTCGTCGAG CGCCTGCGCA TTCTGGCCAA GGGGCTGTTC GGCCTCGCGC CCACGGTGAC CGCCGGACAG GGCTACCAGG AGGTCACCCT GTCGTCGGTC CGCCTGGCCC GGTGGTGGAA GGCGGCGGGG TTCGCCAAGG ACTTGCCCGG TCAGGACCAC TCCGGCAAGG GCTGGACCCC CCGAGTGCCC TCCTCGGTCC TGGAGACCAA CGATCCGGCG GTGTACGCGG CCTTCCTGCG CGGTCTCTTC GAGGCGGACG GCACCGTCCT GGAGGGTGTG CCGAGCATCT CCACCGCGCA CGCCTCCTTC GCCGGAGAGG TCCGCACGCT GCTGCTGACC CTGGGTATGG CCTCCACCAC GCGCACGACC CGGAGCGGGT ACGGCGGGGA CTGCCACGTG GTCCGCCTGC GCAACGTCGA CCACGCCCTG CGCTTCGACG AGACCGTCGG GTTCCTGGGC GACCGCAAGA ACAAGCTCGT CGTCCAACTG GAGTCGGACC GCTCGGCCAA GGGCGACCGG ATCGTTCTGC CCCGCCAGGT GTGGGACGAG CTGGTACCGG TCGGGCACGC CGCGCGGGGG ACGGTCGTGC AGTCGCTGAG GAAGTACGGC GGCGTGGCCC GGCAGCTGGC CTCGGCCATT CACTCCGAGA CGCTCGACGG CAGGCTGGGA CACGCCCTCG GCTACGTCTT CGAGGAGGTC GGCGCCAACG AGGACGGCGG CGTGCAGCCG ACCTACGACA TCTCGGTGCC CGACAACGTC ACCTACGTGG CCAACGGCCT GGTCAGCCAC AACACCATCG GCTTCATGAT GGACTGCGAC ACCACCGGTA TCGAGCCGGA CTTCTCGCTG GTCAAGTTCA AGAAGCTGGT CGGCGGCGGC TCCATGCAGA TCGTCAACCA GGCCATCCCG CGCGCGCTGG GCAACCTCGG CTACCAGGAC GAGCAGATCG AGGCCGTCGT CGAGTACGTC TCCGAGAACG GCCACGTCGT GGACGCGCCC GGCCTGCGCG CCGAGCACTA CGAGGTGTTC GACTGCGCGA TGGGGCTCCG CTACATCCGG CCCATGGGCC ACGTGCGGAT GATGGCCGCG GTACAGCCCT TCCTGTCCGG CGCGATCTCC AAGACGGTGA ACGTGCCGGA GGAGGCCTCG GTCGAGGACT TCGAGCACAT CTACTTCGAG GGCTGGCGGA TGGGCCTGAA GGCGCTCGCC GTCTACCGCG ACAACTGCAA GGTGGGCCAG CCGCTGTCCA CCGGCGGGAC GCGGGAGAAG GAGGCCGGGC CCGAGGCGGA GGCCGTCGAG GCGCCCCGCC CGGTCCGCCG CCGCCTGCCC AAGAAGCGAC CGAGCGAGAC CACGTCGTTC TCCGTGGGCG GGGCCGAGGG CTACATCACC GCGGGCTCCT ACCCGGACGA CGGTCTGGGC GAGGTGTTCA TGAAGCTCGG CAAGCAGGGG TCCACCCTGG CCGGGGTGAT GGACGCCTTC TCCATCGCGA TCTCCATCGC CCTGCAGTAC GGGGTCCCGC TGGAGACCTA CGTGGAGAAG TTCACGAACA TGCGGTTCGA CCCGGCGGGC ATGACCGACG ATCCGGACAT CCGCATGGCC CAGTCGGTGG TGGACTACAT CTTCCGCCGC CTGGCCCTGG ACCACCTGCC CTACGAGGAG CGGGCCGCGC TGGGGGTGCT GTCGGCCGCC GAGCGCCAGG CGCAGGTGGC GGGCGAGGAC CCCGCGCAGG TCGCCACGCA GGTGGAGTCC TACGCCCAGT CCGCCGCCAC CCGCGGGGCG GACGCCCCGG AGGAGGTCTC GGCGGCCTCC GCGCGGGAGC CGCACGCGGC GGCGGAGCGG CCGACCCGGG CGCACTCCAC CGCGGAGCTG ATGGAGGGCA AGGGCTTCGT GGCGGACGCG CCGCTGTGCA TGACCTGCGG TACCAAGATG CGCCCGTCGG GCAGCTGCTA CGCCTGCGAG GGCTGCGGGG CCACCAGCGG TTGCAGCTGA
|
Protein sequence | MTETTSGPAG RKGKGSRKGI RVRRVFTTPG THPYDSLEWE RRDVVMTNWR DGTVNFEQRG VEFPSSWSMN ATQIVTSKYF RGAVGTPERE WSLKQLIDRV VGVYTETGRE HGYFASAEDA EVFDHELKHA LAHQLFSFNS PVWFNVGTNS KAQVSACFIL SVDDTMESIL DWYKEEGIIF KGGSGAGVNL SRIRSSKELL SSGGTASGPV SFMRGADASA GTIKSGGATR RAAKMVVLDV DHPDIEDFVE TKAREEHKIR ALRDAGFDVD LGGDDMFSVQ YQNANNSVRV SDAFMRAVES GSDFGLTSRT TGEVVATVDA KELFQRMARA AWECADPGIQ YDGTIQDWHT TPESGRISAS NPCFPADQRV LTDRGHIPIG DLIKRAARGE TFAVYTNDIT AETDAQNAVV ATIPTQYMVT GTNEILELRF SDGSLLRCTP NHRLWTENRG WVHAEKLLSD DRVVRSFQYA PRSNPALRIP RAALEAVRTV AALPSVRPLY LPEKWDEDPD LAHYLGWLVG DGSVGDQAVV TVYGTAEEQQ NVLPRHQALI ERLTGHRSKP SLQPNGTQQL RITRRTMVEF VRALGLGARA EDKSVPPSLF EAPEETVLEF LQGLFDADGC AVDQKANGTR YIGLGSRSDQ LLRDVQELLA PFGIASRVYR TSEGKPDSFS YTRKDGSTVT YGSDGPFFDL RISAQSMQEF SALVNFSLEG KSEKLREALD FRRMYRTRTT TRLFSRRSAG FETTYNLTEP RNHSYIVGGT VVANCSEYMS LDDSSCNLAS INLLKFLRED DTFDVERFTA LTELVITAMD VSITFADFPT EKIGETTRAY RQLGIGYANL GALLMATGHA YDSEGGRAVA AAVTSLMTGT AYRRSAELAG VVGPYDGYRR NERAHKRVMR KHAAANDDLR TVGTLEEPIH AAATREWAEC LRIGERNGWR NAQASLLAPT GCLTGDSMVT TDRGLVRLTE LGDAYGPRWQ DLSARVSTDE GPREATRFFV NGEEPTRRIV TRGGYRLQGT HTHRIKVVSP RTGDWEWKRF ADIAEGDVVP VQLGTLVGQP RRVVLPVLDQ AYYTGDHDLF VPEAVDEELA ELVGYFMGDG SLHAKGIRMC VADTDEDVVE RLRILAKGLF GLAPTVTAGQ GYQEVTLSSV RLARWWKAAG FAKDLPGQDH SGKGWTPRVP SSVLETNDPA VYAAFLRGLF EADGTVLEGV PSISTAHASF AGEVRTLLLT LGMASTTRTT RSGYGGDCHV VRLRNVDHAL RFDETVGFLG DRKNKLVVQL ESDRSAKGDR IVLPRQVWDE LVPVGHAARG TVVQSLRKYG GVARQLASAI HSETLDGRLG HALGYVFEEV GANEDGGVQP TYDISVPDNV TYVANGLVSH NTIGFMMDCD TTGIEPDFSL VKFKKLVGGG SMQIVNQAIP RALGNLGYQD EQIEAVVEYV SENGHVVDAP GLRAEHYEVF DCAMGLRYIR PMGHVRMMAA VQPFLSGAIS KTVNVPEEAS VEDFEHIYFE GWRMGLKALA VYRDNCKVGQ PLSTGGTREK EAGPEAEAVE APRPVRRRLP KKRPSETTSF SVGGAEGYIT AGSYPDDGLG EVFMKLGKQG STLAGVMDAF SIAISIALQY GVPLETYVEK FTNMRFDPAG MTDDPDIRMA QSVVDYIFRR LALDHLPYEE RAALGVLSAA ERQAQVAGED PAQVATQVES YAQSAATRGA DAPEEVSAAS AREPHAAAER PTRAHSTAEL MEGKGFVADA PLCMTCGTKM RPSGSCYACE GCGATSGCS
|
| |