Gene Ndas_3299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3299 
Symbol 
ID9247161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3934247 
End bp3937177 
Gene Length2931 bp 
Protein Length976 aa 
Translation table11 
GC content73% 
IMG OID 
ProductCoA-binding domain protein 
Protein accessionYP_003681211 
Protein GI297562237 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGCAC CCCGGCCACA CCGCCTCCGG ACACCCCCGC GGAGCCGCGA ACGCCCACGG 
GGCGGCCGAT CCGGTCCGCG GACGGGGCAC CGGCCCCGAC CCGCGCCTCC GCGATCGGGG
GACACACCGT ACGCGGTCCC GAGCGGGGTT TTCGCGCGGC CCGCACGGAC TTTCCCCGGA
TTCGGCCGTT TGTCGTCTAG TCTCGCAGTC GTGCAGTCCT ACCCGAACCA CTGGGAAGCC
GACGTCGTCC TGACCGACGG AGGCACCGCG CACCTGCGCC CCATCACCCC CGAAGACGCC
GACCTGCTCC GCGAGTTCCA CTCCCGTCTC TCCCCGGAGA CGATCTACTA CCGGTTCTTC
GCGCCCTACC CCAGGCTCTC CGACCGCGAC GTCAAACGCT TCACCACCGT CGACTACGAG
GACCGCGTGG CACTGGTCGC CACCATCTCC GACTCCCTCG TCTCCGTGGT GCGCTACGAC
AAGGTGGCGC CGGAGGAGGC GGAGGTCGCC TTCGTGGTGG AGGACGCCCA CCAGGGCCGC
GGCCTGGCCT CGGTCATGCT GGAGCACATC GGCGCGGCCG CGCGCGAACG CGGGATGCGC
CGCTTCATCG CCGACGTGCT GCCCGAGAAC CGGCGCATGA TCAACGTCTT CCGCGAGGCC
GGGTACACCG CCCAGCAGAC CTTCGACGAG GGCGTCATCC GCCTCACCCT GGACCTCCAG
CCCACCGACG ACTCCACCGA GGTCATGCGG GCCCGCGAGC AGCGCGCCGA GTCGCGCTCC
ATCGCCCGCC TGCTCTTCCC GAACTCGGTC GCGGTCATCG GCGCCAGCCG CACCGCGCAC
ACCATCGGCC AGACCGCCCT GCGCAACCTC CTGGGCGGGG AGTTCCAGGG CCCGGTCTAC
CCGGTCCACC CCGAGGCCAA GGCGGTCGTG GGCGTGCGCG CCTACCCCTC GGTCCTGGAC
ATCCCCGACC AGGTCGACCT CGCCGTCGTG GCGGTGCGCG CCGACATGGT CGTCGACGTG
GTCGAGCAGT GCGCGGACAA GGGCGTGCAC GGCCTGGTCG TGGTCAGCTC CGGGTTCGGC
GAGACCGGAC CCGAGGGCCG CGCCCGCCAG GACGAGCTGG TGCGCACCGC CCGCGCGGCC
GGGATGCGCG TGGTGGGCCC CAACTGCCTG GGCATCGCCA ACACCGACCC CGAGATCTCG
CTCAACGCCA CCCTGTCCCC GGACCTGCCG CCCTCGGGCA CGATCGGGTT CTTCTCCCAG
TCCGGTGCCC TGGGCCGGGC CATCCTCCAG CGCGTGGCCG AGCGCGGCAT GGGCCTGTCC
ACCTTCGTCT CGGCGGGCAA CCGCGCCGAC GTGTCCGGCA ACGACCTCAT GCAGTACTGG
CAGGAGGACC CGGCCACGGA GGTGGTGCTC CAGTACCTGG AGTCGCTGGG CAACCCGCGC
AAGTTCACCC GCCTGGCCCG GCGACTGGCC AAGCAGAAGC CGGTCGTGGC GGTGCGCAGC
GGCGGCTCGG CGCGGACCAC CCCCACCGGC CACGCCGCGG GCGGGCTCTC CCTGCCCGAC
TACGCGGTCA CCTCGCTGTT CCAGCAGGCC GGAGTGGTGC GGGTGGACGA CATCACGCAG
ATGTTCGACG CCGCCCAGGT GTTCGCCTAC CAGCCCCTGC CCCAGGGGCC CCGCGTGGGC
ATCATCGGCA ACTCCGACTC CCTGGAGCTG CTGGTCAAGG ACGCGGCCGT CCGCCAGGGG
CTCAAGCCGC ACGACCCGGT CAACCTCGGC CCCCAGGCCA CCGCGGAGGA CTTCGACCGC
GCCCTGGAGA CGGCCCTGGC CGCCGAGGAC GTGCACTCGG TGGTGGTCGT GTTCGTCCCC
GCGCTGCACC CCATCTCCGA CGACGTCGCC CGCGTGCTGC GGGCCCGCTC CCTGGACTCG
ACCAAGCCCG TCGTCACCAC CTACCTGGCC CGTCAGGGGA TCCCCGAGGA GCTGCGCCGC
GTCGGAGACC GGGGCCAGAC CCTGCGCGGC TCGGTGCCCT CCTACCCCTC GCCCGAGGAC
GCCGTGCGCG CCCTGGCCTA CGCCACCCGC TACGCCCAGT GGCGCGACCG CAAACCCGGA
CGCCACCCCG AGCTGCCCGA CATCGACGGG GCCCGGGCCC GCGCCACCAT CGTCCGCGCG
CTCAAGAACG CCACTCCCTC GGCGGAGGAG ATCGCCTGGT TCGGCGGCGA GCGCCGCTAC
GACGAGGAGA CGGCGATCTC CGGCGAGGAC GCCCGCGACC TGCTGGCCTG CTACGGCATC
GCCGCCTACC CCGACATCCC GGTGACGTCG GAGGAGGAGG CCGTGGTGGC CGCGGGCCAG
CTGGGCTACC CGGCGGTGGT CAAGGCCGAC TCACCGGACC TGCGCCTGCG CGCGGGCGGC
ACGTTCGTCC GCGCCGACCT GCGCACCCCC GACGACGTGC GCAGCGCCTT CGCGGCCCTG
CACGACCGCT TCGGCGACGA GGCCTCGCTG GTCGTGCAGC GCATGGTGGC CCCCGGGGTG
CCCACGGTCA TCCGGGCGGG CGACAACCAG TCCTTCGGAT CGGTGGTCTC CTTCGGGCTG
GCGGACGTGA CCGCCGAACT GCTCGACGAC CGGGCGTTCC GGCTGGCGCC GCTCACCGAC
ATGGACGCCG CCGACCTCAT CCACGCCGTG CGGGCCGCCC CGCTGCTGTT CGGACTGCCC
GCCGGTGCGA CCTCGCTCGC CGAGCAGCCC AACGTGGAGG CTCTGGAGGA ACTCCTCGTC
CGGGTCTCCC GCCTGGTGGA GGCCTTCCCC GAGATCGGCT ACATCGACCT GGACCCGGTC
CTGGTCAACG CCACCGGCGC CCACGTGCTG GGCGCGCGCG TCTGGCTCCG TGAGGCCCCC
GACGTGCGGC CCGACGCCGG GCCCCGGCGA CTGCGCGGGG TGACGTTCTG A
 
Protein sequence
MTAPRPHRLR TPPRSRERPR GGRSGPRTGH RPRPAPPRSG DTPYAVPSGV FARPARTFPG 
FGRLSSSLAV VQSYPNHWEA DVVLTDGGTA HLRPITPEDA DLLREFHSRL SPETIYYRFF
APYPRLSDRD VKRFTTVDYE DRVALVATIS DSLVSVVRYD KVAPEEAEVA FVVEDAHQGR
GLASVMLEHI GAAARERGMR RFIADVLPEN RRMINVFREA GYTAQQTFDE GVIRLTLDLQ
PTDDSTEVMR AREQRAESRS IARLLFPNSV AVIGASRTAH TIGQTALRNL LGGEFQGPVY
PVHPEAKAVV GVRAYPSVLD IPDQVDLAVV AVRADMVVDV VEQCADKGVH GLVVVSSGFG
ETGPEGRARQ DELVRTARAA GMRVVGPNCL GIANTDPEIS LNATLSPDLP PSGTIGFFSQ
SGALGRAILQ RVAERGMGLS TFVSAGNRAD VSGNDLMQYW QEDPATEVVL QYLESLGNPR
KFTRLARRLA KQKPVVAVRS GGSARTTPTG HAAGGLSLPD YAVTSLFQQA GVVRVDDITQ
MFDAAQVFAY QPLPQGPRVG IIGNSDSLEL LVKDAAVRQG LKPHDPVNLG PQATAEDFDR
ALETALAAED VHSVVVVFVP ALHPISDDVA RVLRARSLDS TKPVVTTYLA RQGIPEELRR
VGDRGQTLRG SVPSYPSPED AVRALAYATR YAQWRDRKPG RHPELPDIDG ARARATIVRA
LKNATPSAEE IAWFGGERRY DEETAISGED ARDLLACYGI AAYPDIPVTS EEEAVVAAGQ
LGYPAVVKAD SPDLRLRAGG TFVRADLRTP DDVRSAFAAL HDRFGDEASL VVQRMVAPGV
PTVIRAGDNQ SFGSVVSFGL ADVTAELLDD RAFRLAPLTD MDAADLIHAV RAAPLLFGLP
AGATSLAEQP NVEALEELLV RVSRLVEAFP EIGYIDLDPV LVNATGAHVL GARVWLREAP
DVRPDAGPRR LRGVTF