Gene Ndas_3275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3275 
Symbol 
ID9247137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3910461 
End bp3911189 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content74% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003681187 
Protein GI297562213 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.906073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACC AGACCCGGTC CGGAGGACCC CTGCTGTCCG CGCGGGACCG CACCCTGGAC 
ACCATCCGCC GCGCGATCAT CACCCTGGAG CTCAAGCCGG GCACGCCCCT GTCGGAGAAC
GAGCTCGCCA CCGAGCTCGC CGTGAGCCGG ACGCCCGTGC GCGAGAGCCT CATCCTGCTG
CGCGAGGAGG GGCTGGTGGA GGTCTACCCC CAGGTCGGCA CGTTCGTCTC ACTCGTGGAC
CCCGAGCGCG TCCGGCAGGC GCAGTTCATC CGGGAGGCGG TGGAGTGCAC CTCCCTCGCC
CAGGCCCGGC CCCCCTTCTC GGCGGACCAC GTCGGCGATC TGCGCGTCCT GCTCGGCGCG
CAGCGGGAGG CGGGCGGCGG CGACCACGAC CGCTTCTTCG AGCTGGACGA GGACTTCCAC
CGCTCGCTGC TGGCGCTGGC GGGCAACGAG AGCGCCTGGC GGACGGTGAA CGCGGCCAAG
GCCCACCTGG ACCGGGCCCG GCGGCTGAGC CTGATCGACA CGCGCCCGAT CGGGGAGCTG
GTGGACCAGC ACACGCTGGT CGTGGACGCG ATCGAGGCCG GGGACACCGG GACCGCCGTG
GAGGCCCTGC GCTCCCACCT GCGGGCGGTG TTCGAGGACG TCGGGCGGAT CCGGGCCGCG
TCACCGGAGT TCTTCTCGGA CGGGCGGCCC CGCCGTCCCG TCCGCAGGAC CGTGACCTCG
CTGAGGTAG
 
Protein sequence
MADQTRSGGP LLSARDRTLD TIRRAIITLE LKPGTPLSEN ELATELAVSR TPVRESLILL 
REEGLVEVYP QVGTFVSLVD PERVRQAQFI REAVECTSLA QARPPFSADH VGDLRVLLGA
QREAGGGDHD RFFELDEDFH RSLLALAGNE SAWRTVNAAK AHLDRARRLS LIDTRPIGEL
VDQHTLVVDA IEAGDTGTAV EALRSHLRAV FEDVGRIRAA SPEFFSDGRP RRPVRRTVTS
LR