Gene Ndas_3243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3243 
Symbol 
ID9247100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3876264 
End bp3877391 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content77% 
IMG OID 
Product3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) 
Protein accessionYP_003681155 
Protein GI297562181 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.17331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCA GCCGCCCGCC CTCGCCCCAG GACCCGCTGC GCGCAAGGCC CGGGGCCGCC 
GCCCCCGACG GAGGCGCCGT GCGTCCGGAC CCCGCACCCC ACGAGTCGGC GGACCGGGGC
GCCATCACCG TGGGCCACCT GCCGCCCGAC CTCACCCGCG CCCTCTACCG CCACATGAGG
ACCGCGCGCG ACCTGGACAC CGAGGCCATC GCCCTCCAGC GCCAGGGCGT CTTCCCCGCC
TACGTGTCCG TGCGCGGCCA GGAGGCCGCC CAGGTCGCCA GCGCCTCGGC CCTGGACCCC
GCGCGCGACT TCGTCTTCCC CACCTACCGG GAGATGGCCT CCGCCCTGGC CTACGGGGTG
GAGATGGTCG GCTACATGGC CACCCACCGC GCCCTGTGGC ACGGCGGCCT CTACGACGTC
GCGGCCTCGC GGTTCGGCGC CGTCAACGCC GTGGTCGGCG GCCCCGTCCC GCACGCGGTC
GGCTGGGCCG TGGGCGAGCG GCTGCGCGGC GACGACGGTG TGGCCCTGGC CTACTTCGGC
GACGGCGCCA GCTCCGAGGG CGACGTCCAC GAGGCCATGA ACTTCGCCGG GGTCTTCGGC
GCCCCCGTGG TCTTCTTCTG CCAGAACAAC CAGTGGGCGC TGTCGGTGCC CAACCACCGC
CAGGTCGCGG GCGGCTCGGT CAGCGCGCGC GCCGAGGGCT ACGGCATGCC CGGCGTGCTG
GTGGACGGCA ACGACGCGGG CGCGGTCCAC GAGGCCACCG CCGAGGCCGT CGCCCGGGCC
CGCCGCGGCG AGGGGCCCAC CCTCATCGAG GCGCTCACCT ACCGCGTGGA GCCGCACTCC
ACCTCCGACG ACCCCGGCCG CTACCGCGAC GACGCCGAGG CCCAGCGCTG GCGCGAGCGC
GACCCCGTCA CCCTGCTGCG CGAGGCCCTG CTCGCCGCCG GGCACGCCGA CGAGGGCGAA
CTCGCCCGGG TCGACGCCGA GGCCCGCCGG GAGGCCGAGC GCATCCGCGA CGGCGTGGCC
ACCGCGCCCG AACCGGACGG ATCGGAGCTG TTCACCCACG TCTTCCGGGA GACCACCGAG
GAGCTGACCC GGCAGCGCCG CACCTGGCAG GAAGAGGTCG AGCTGTGA
 
Protein sequence
MPASRPPSPQ DPLRARPGAA APDGGAVRPD PAPHESADRG AITVGHLPPD LTRALYRHMR 
TARDLDTEAI ALQRQGVFPA YVSVRGQEAA QVASASALDP ARDFVFPTYR EMASALAYGV
EMVGYMATHR ALWHGGLYDV AASRFGAVNA VVGGPVPHAV GWAVGERLRG DDGVALAYFG
DGASSEGDVH EAMNFAGVFG APVVFFCQNN QWALSVPNHR QVAGGSVSAR AEGYGMPGVL
VDGNDAGAVH EATAEAVARA RRGEGPTLIE ALTYRVEPHS TSDDPGRYRD DAEAQRWRER
DPVTLLREAL LAAGHADEGE LARVDAEARR EAERIRDGVA TAPEPDGSEL FTHVFRETTE
ELTRQRRTWQ EEVEL