| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3242 |
|---|
| Symbol | |
|---|
| ID | 9247099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 3875248 |
|---|
| End bp | 3876267 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | Transketolase central region |
|---|
| Protein accession | YP_003681154 |
|---|
| Protein GI | 297562180 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0939038 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGAGC TGATCGAACG CGCCGACACC GCCGCCGAGG CCCCCGCGGT CGAGCTGTCC
ATGCAGCAGG CCATCAACCG CGCCCTGCGC GACCTGCTCG CCGAGGACCC CGACGTGCTG
GTCTTCGGCG AGGACGTGGG CGCCCTGGGC GGGGTCTTCC GCGTCACCGA CGGGCTCCAG
AAGGAGTTCG GGGACACGCG TGTCTTCGAC ACCCCGCTGG CCGAGTCCGC CATCATGGGC
ATGGCGGTCG GCCTGGCCAT GAACGGCTGG CGGCCCGTCC CCGAGCTCCA GTTCGACGGT
TTCGCCTACC CCGCGATCGA CCAGATCGTC AACCAGGTGG CGCGCATGAA CTACCGCACC
CGCGGCGCGA CCCCCATGCC GATCACCCTG CGCCTGCCCT CCTTCGGCGG CATCCAGGCG
CCCGAGCACC ACGGCGAGAG CCTGGAGGCG CTCTTCGCCC ACACCCCCGG TCTCAAGGTC
GCCGCGCCCT CGGACCCCGC CGACGCCTAC AGCCTGCTGC TCCAGTCGGT GCGCTCCGAC
GACCCCGTCG TCTACATGGA GCCCAAGGCC CGCTACTGGG ACCGCAGGCC CGTGCGGCTG
CGCGAGCCCA GCGAGCCCAT CGGCACCAGC CGCATCGTGC GCCCTGGCAG GCACGCCACC
CTCATCGCCT GGGGCGCCAT GGTGCACCGC TGCGTCCAGG TGGCCGACCT GGCCGCGGAG
GACGGCGTGG ACCTGGAGGT GCTGGACCTG CGCTGGCTCA AGCCCCTGGA CGCCGCCGGG
ATGGCCGCCT CGGTCGCGCG CACCGGACGG GCCGTGGTCG TGCACGAGGC GCCGCTGACC
GCCGGGCTCG GCGCGGAGGT GGCCGCCCTG GTCACCGAGC GCTGCTTCCG CGACCTGTCC
GCCCCCGTCC AGCGCGTCAC CGGGTTCGAC GTGCCCTACC CCGCGGGCCC CCTGGAGCCG
CAGTACCTGC CGACCATCGA CCGCGTCCTG CTCGCGGTGC AACGGACCCT GGAGTACTAG
|
|---|
| Protein sequence | MTELIERADT AAEAPAVELS MQQAINRALR DLLAEDPDVL VFGEDVGALG GVFRVTDGLQ
KEFGDTRVFD TPLAESAIMG MAVGLAMNGW RPVPELQFDG FAYPAIDQIV NQVARMNYRT
RGATPMPITL RLPSFGGIQA PEHHGESLEA LFAHTPGLKV AAPSDPADAY SLLLQSVRSD
DPVVYMEPKA RYWDRRPVRL REPSEPIGTS RIVRPGRHAT LIAWGAMVHR CVQVADLAAE
DGVDLEVLDL RWLKPLDAAG MAASVARTGR AVVVHEAPLT AGLGAEVAAL VTERCFRDLS
APVQRVTGFD VPYPAGPLEP QYLPTIDRVL LAVQRTLEY
|
|---|
| |